RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 BTN2A1Q7KYR7 527 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 SLC16A14Q7RTX9 510 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 OR1F12Q8NHA8 337 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 EXO5Q9H790 373 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 ACKR4Q9NPB9 350 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 SLC7A10Q9NS82 523 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 TNRC6AQ8NDV7 1962 aaKnown RBP17.12■□□□□ 0.33
VRK2-205ENST00000432057 A0A0A6YYJ9 748 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 NAP1L6A6NFF2 107 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 BPNT1O95861 308 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 H2AFB2P0C5Z0 115 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 PRSS3P35030 304 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 RRAS2P62070 204 aaPredicted RBP17.12■□□□□ 0.33
VRK2-205ENST00000432057 PCGF3Q3KNV8 242 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 AWAT2Q6E213 333 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 SKA3Q8IX90 412 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 FDCSPQ8NFU4 85 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 PTX4Q96A99 478 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 RNF170Q96K19 258 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 FYTTD1Q96QD9 318 aaKnown RBP17.12■□□□□ 0.33
VRK2-205ENST00000432057 LDAHQ9H6V9 325 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 V9GYS6 101 aa17.12■□□□□ 0.33
VRK2-205ENST00000432057 OR6C6A6NF89 314 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 RBBP9O75884 186 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 DHRS3O75911 302 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 ACTL6AO96019 429 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 HCKP08631 526 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 RAB6AP20340 208 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 HTR5AP47898 357 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 CAPZA1P52907 286 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 QRFPP83859 136 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 PSG4Q00888 419 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 CBX3Q13185 183 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 PAQR4Q8N4S7 273 aaPredicted RBP17.11■□□□□ 0.33
VRK2-205ENST00000432057 ZBTB8BQ8NAP8 495 aaPredicted RBP17.11■□□□□ 0.33
VRK2-205ENST00000432057 ACBD4Q8NC06 268 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 AKAP1Q92667 903 aaKnown RBP eCLIP17.11■□□□□ 0.33
VRK2-205ENST00000432057 FAM46BQ96A09 425 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 LINC00470Q9BZP3 86 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 OR2H1Q9GZK4 316 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 WNT5BQ9H1J7 359 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 C20orf85Q9H1P6 137 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 NEK6Q9HC98 313 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 MCUBQ9NWR8 336 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 SPRR3Q9UBC9 169 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 RAB22AQ9UL26 194 aa17.11■□□□□ 0.33
VRK2-205ENST00000432057 IGKV1-9A0A0C4DH69 117 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 VSIG8P0DPA2 414 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 CEACAM1P13688 526 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 FAHP16930 419 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 ECH1Q13011 328 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 DMRTC1Q5HYR2 192 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 C9orf135Q5VTT2 229 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 DRAM2Q6UX65 266 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 ANGPTL5Q86XS5 388 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 OR10A2Q9H208 303 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 NKIRAS2Q9NYR9 191 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 TIMM10BQ9Y5J6 103 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
VRK2-205ENST00000432057 C7orf66A4D0T2 115 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 THBS4P35443 961 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 OR3A4PP47883 348 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 KCNJ8Q15842 424 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 ZFP69Q49AA0 526 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 OR2AE1Q8NHA4 323 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 GPX8Q8TED1 209 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 BCO1Q9HAY6 547 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 PARPBPQ9NWS1 579 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 ELF5Q9UKW6 265 aaPredicted RBP17.1■□□□□ 0.33
VRK2-205ENST00000432057 PIGLQ9Y2B2 252 aa17.1■□□□□ 0.33
VRK2-205ENST00000432057 MRPS28Q9Y2Q9 187 aaKnown RBP17.1■□□□□ 0.33
VRK2-205ENST00000432057 TRGV5A0A0B4J1U4 118 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 FCER2P06734 321 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 CSF1P09603 554 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 PCBD1P61457 104 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 ARF1P84077 181 aaKnown RBP17.09■□□□□ 0.33
VRK2-205ENST00000432057 KRTAP27-1Q3LI81 207 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 NPRL2Q8WTW4 380 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 SGK3Q96BR1 496 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 GHITMQ9H3K2 345 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 ZDHHC11Q9H8X9 412 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 ZMAT3Q9HA38 289 aaKnown RBP17.09■□□□□ 0.33
VRK2-205ENST00000432057 DLL3Q9NYJ7 618 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 FLVCR2Q9UPI3 526 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 MED12LQ86YW9 2145 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 ZFHX4Q86UP3 3567 aa17.09■□□□□ 0.33
VRK2-205ENST00000432057 A0A0A6YYH2 397 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 A6NJ64 397 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 ZNF724A8MTY0 619 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 TM4SF5O14894 197 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 FARS2O95363 451 aaKnown RBP17.08■□□□□ 0.33
VRK2-205ENST00000432057 MMP7P09237 267 aaPredicted RBP17.08■□□□□ 0.33
VRK2-205ENST00000432057 PSMB1P20618 241 aaKnown RBP17.08■□□□□ 0.33
VRK2-205ENST00000432057 FOXG1P55316 489 aaPredicted RBP17.08■□□□□ 0.33
VRK2-205ENST00000432057 LINC00303Q3SY05 128 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 GLIPR1L1Q6UWM5 242 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 Q6ZSR3 168 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 CHMP1BQ7LBR1 199 aa17.08■□□□□ 0.33
VRK2-205ENST00000432057 ZNF101Q8IZC7 436 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms