RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 NPDC1Q9NQX5 325 aaPredicted RBP11.3□□□□□ -0.6
DDX56-204ENST00000431640 PLSCR3Q9NRY6 295 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 BOLA1Q9Y3E2 137 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 RHBDD3Q9Y3P4 386 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 NPTNQ9Y639 398 aa11.3□□□□□ -0.6
DDX56-204ENST00000431640 UBE2QL1A1L167 161 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 SMAD9O15198 467 aaKnown RBP11.29□□□□□ -0.6
DDX56-204ENST00000431640 TRAPPC6AO75865 159 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 ALX3O95076 343 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 HPXP02790 462 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 UBBP0CG47 229 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 ECH1Q13011 328 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 ENDOGQ14249 297 aaKnown RBP11.29□□□□□ -0.6
DDX56-204ENST00000431640 PHYHD1Q5SRE7 291 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 ABHD17BQ5VST6 288 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 FAM57BQ71RH2 274 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 GABRG1Q8N1C3 465 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 OR13C9Q8NGT0 318 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 CPT1CQ8TCG5 803 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 NABP1Q96AH0 204 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 RADILQ96JH8 1075 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 FAM173AQ9BQD7 235 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
DDX56-204ENST00000431640 GINS4Q9BRT9 223 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 SRXN1Q9BYN0 137 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 ALX4Q9H161 411 aaPredicted RBP11.29□□□□□ -0.6
DDX56-204ENST00000431640 KCNK15Q9H427 330 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 FLVCR1Q9Y5Y0 555 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 NCOR2Q9Y618 2525 aa11.29□□□□□ -0.6
DDX56-204ENST00000431640 LRRC3CA6NJW4 275 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 NKX2-8O15522 239 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 MTRF1O75570 445 aaKnown RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 RAB3DO95716 219 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CYB5AP00167 134 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CXCL3P19876 107 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 GDF1P27539 372 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 RAD52P43351 418 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 SELENOPP49908 381 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 QRFPP83859 136 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 GUCA2AQ02747 115 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CCDC92Q53HC0 331 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 ZNF626Q68DY1 528 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 GGNQ86UU5 652 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ANGPTL5Q86XS5 388 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 OR14K1Q8NGZ2 314 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 SNIP1Q8TAD8 396 aaKnown RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 KCNG3Q8TAE7 436 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 AQP3Q92482 292 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CPNE4Q96A23 557 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 BEX1Q9HBH7 125 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 GHRLQ9UBU3 117 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 B4GALT7Q9UBV7 327 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 MGAT4AQ9UM21 535 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 HSPB11Q9Y547 144 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 MED19A0JLT2 244 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 SMLR1H3BR10 107 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ZNF780AO75290 641 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 IGLV3-1P01715 115 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CD3DP04234 171 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CST2P09228 141 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ABOP16442 354 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 POU3F2P20265 443 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 OTX1P32242 354 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 THBS4P35443 961 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CD96P40200 585 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 MEF2DQ14814 521 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ZNF260Q3ZCT1 412 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 Q5BKY6 102 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 AWAT2Q6E213 333 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 LAMTOR1Q6IAA8 161 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 SEZ6L2Q6UXD5 910 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 Q6ZSR3 168 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 AAED1Q7RTV5 226 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 SLC36A1Q7Z2H8 476 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 GPR137CQ8N3F9 429 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 FAM109AQ8N4B1 249 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 PAQR4Q8N4S7 273 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 OR52H1Q8NGJ2 320 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 CCDC107Q8WV48 283 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 ADGRG7Q96K78 797 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 FAM71F1Q96KD3 344 aaPredicted RBP11.28□□□□□ -0.6
DDX56-204ENST00000431640 DLL4Q9NR61 685 aa11.28□□□□□ -0.6
DDX56-204ENST00000431640 SPENQ96T58 3664 aaKnown RBP11.27□□□□□ -0.61
DDX56-204ENST00000431640 A0A0G2JMM0 328 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 A0A1W2PPB8 328 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 A0A1W2PRS3 328 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 ZNF716A6NP11 495 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 TMEM14DPA8MWL7 114 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 KIR3DP1A8MWS1 328 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.61
DDX56-204ENST00000431640 DISC1C4P0D8 188 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 F5H5K5 113 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 PYCARD-AS1I3L0S3 204 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 RAB27BO00194 218 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 CXCL13O43927 109 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 CD74P04233 296 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.61
DDX56-204ENST00000431640 VSIG8P0DPA2 414 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms