RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 ASGR1P07306 291 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 CLTAP09496 248 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 CD37P11049 281 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ANXA8P13928 327 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ZNF14P17017 642 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 GSTM3P21266 225 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 USF1P22415 310 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 MPIP34949 423 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 RFC3P40938 356 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 CLDN6P56747 220 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 C2orf54Q08AI8 447 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ZNF616Q08AN1 781 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 SIGLEC14Q08ET2 396 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 FUT5Q11128 374 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 BIKQ13323 160 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 MAD2L1BPQ15013 274 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 MAPRE2Q15555 327 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 RNASE13Q5GAN3 156 aaKnown RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 ANXA8L1Q5VT79 327 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 THOC7Q6I9Y2 204 aaKnown RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 USP50Q70EL3 339 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 CBLN2Q8IUK8 224 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 CCDC148Q8NFR7 591 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 SFXN5Q8TD22 340 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 GLYATL2Q8WU03 294 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ASZ1Q8WWH4 475 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ESR2Q92731 530 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 SNF8Q96H20 258 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 RBBP8Q99708 897 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 TIMM29Q9BSF4 260 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 SFXN3Q9BWM7 321 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ING2Q9H160 280 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 ZSCAN16Q9H4T2 348 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 CSNK1G1Q9HCP0 422 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 CD209Q9NNX6 404 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 RRAGDQ9NQL2 400 aaPredicted RBP1.18□□□□□ -2.22
CDC40-204ENST00000431461 CHRAC1Q9NRG0 131 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 HMGXB4Q9UGU5 601 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 NSD2O96028 1365 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 DENND4AQ7Z401 1863 aa1.18□□□□□ -2.22
CDC40-204ENST00000431461 MROH5Q6ZUA9 1318 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 NUP214P35658 2090 aaPredicted RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 IGHV3-72A0A0B4J1Y9 119 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TRAV25A0A0B4J276 109 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 ZNF98A6NK75 572 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 NCBP2LA6PVI3 153 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 GABRR3A8MPY1 467 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TRDMT1O14717 391 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 PSPHP1O15172 72 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 OR7C2O60412 319 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SLC16A7O60669 478 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 FCN3O75636 299 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 FARS2O95363 451 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 HLA-DQB1P01920 261 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 MAS1P04201 325 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SNRPAP09012 282 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 UBCP0CG48 685 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 RALBP11234 206 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 CTRB1P17538 263 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 CELP19835 753 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 IDH2P48735 452 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 NUDT2P50583 147 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 CRISP1P54107 249 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TAS2R46P59540 309 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 DGCR6Q14129 220 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 WDR43Q15061 677 aaKnown RBP eCLIP1.17□□□□□ -2.22
CDC40-204ENST00000431461 STK38Q15208 465 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 MRPL23Q16540 153 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 TRMT5Q32P41 509 aaKnown RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 KRTAP13-2Q52LG2 175 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TPRG1LQ5T0D9 272 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 PLCXD3Q63HM9 321 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SAXO2Q658L1 398 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 PRSS54Q6PEW0 395 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 ULK3Q6PHR2 472 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TMEM220Q6QAJ8 160 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 ZNF547Q8IVP9 402 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SLC35G3Q8N808 338 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 WDR31Q8NA23 367 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 FAM184AQ8NB25 1140 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 TMEM104Q8NE00 496 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SLC26A10Q8NG04 563 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 OR10AD1Q8NGE0 317 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 OR10W1Q8NGF6 305 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 OR5M1Q8NGP8 315 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 KLF14Q8TD94 323 aaPredicted RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 RXFP4Q8TDU9 374 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 GPX8Q8TED1 209 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 DCAKDQ8WVC6 231 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 RAB1CQ92928 201 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 RPEQ96AT9 228 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SGTBQ96EQ0 304 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 SMARCD1Q96GM5 515 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 RNF145Q96MT1 663 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 IP6K3Q96PC2 410 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 CSPG4P5Q96PW8 444 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 FOXC2Q99958 501 aa1.17□□□□□ -2.22
CDC40-204ENST00000431461 RTBDNQ9BSG5 229 aaPredicted RBP1.17□□□□□ -2.22
CDC40-204ENST00000431461 GGTLC1Q9BX51 225 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms