RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 SNRPBP14678 240 aaKnown RBP11.52□□□□□ -0.57
PTCH1-207ENST00000429896 HCCSP53701 268 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 TLE1Q04724 770 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 EGR3Q06889 387 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 YIF1BQ5BJH7 314 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 RNLSQ5VYX0 342 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 OR4A16Q8NH70 328 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 GHSRQ92847 366 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 MCHR2Q969V1 340 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 IGKV3-11P04433 115 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 ACHEP22303 614 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 UBAC2Q8NBM4 344 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 FGGYQ96C11 551 aa11.52□□□□□ -0.57
PTCH1-207ENST00000429896 AHRRA9YTQ3 701 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OIP5O43482 229 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 GALEQ14376 348 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 TESK1Q15569 626 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 C11orf91Q3C1V1 193 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 PDLIM3Q53GG5 364 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR6F1Q8NGZ6 308 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 ARL11Q969Q4 196 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 MOGAT1Q96PD6 335 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 BIN3Q9NQY0 253 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 MGAT2Q10469 447 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 RAB35Q15286 201 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR6X1Q8NH79 312 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 PLA2G12AQ9BZM1 189 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 SIAEQ9HAT2 523 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 SNAPC3Q92966 411 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 MFFQ9GZY8 342 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 ACOXLQ9NUZ1 547 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 PTPRDP23468 1912 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 NXPH2O95156 264 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR1J1Q8NGS3 322 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR1F12Q8NHA8 337 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR51E1Q8TCB6 317 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 PARP12Q9H0J9 701 aaKnown RBP11.51□□□□□ -0.57
PTCH1-207ENST00000429896 GABRPO00591 440 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 CNIH1O95406 144 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 GUSBP08236 651 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 FABP6P51161 128 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 HIST2H3PS2Q5TEC6 136 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 OR52H1Q8NGJ2 320 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 GIMAP1Q8WWP7 306 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 REEP6Q96HR9 211 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 IL20Q9NYY1 176 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 SCGB1D1O95968 90 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 PIPP12273 146 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-207ENST00000429896 FAM185AQ8N0U4 392 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 ZFP82Q8N141 532 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 GDPD1Q8N9F7 314 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 UFSP2Q9NUQ7 469 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 RABL2AQ9UBK7 228 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-207ENST00000429896 RABL2BQ9UNT1 228 aa11.51□□□□□ -0.57
PTCH1-207ENST00000429896 ZDBF2Q9HCK1 2354 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 GABARAPO95166 117 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 CLDN1O95832 211 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 PHLDA2Q53GA4 152 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 LYPD4Q6UWN0 246 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 APCDD1LQ8NCL9 501 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM104Q8NE00 496 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 ASB10Q8WXI3 467 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 RBMXL1Q96E39 390 aaKnown RBP11.5□□□□□ -0.57
PTCH1-207ENST00000429896 FBXO17Q96EF6 278 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 RNF170Q96K19 258 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 OR10J4P0C629 311 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 FOSL1P15407 271 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 FMODQ06828 376 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 CLINT1Q14677 625 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 SYT6Q5T7P8 510 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-207ENST00000429896 C1QL3Q5VWW1 255 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM200AQ86VY9 491 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 TMEM106AQ96A25 262 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 APOBEC3DQ96AK3 386 aaPredicted RBP11.5□□□□□ -0.57
PTCH1-207ENST00000429896 MTCH1Q9NZJ7 389 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 CSF1P09603 554 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 NDUFB7P17568 137 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 SERPINF1P36955 418 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 SLC25A1P53007 311 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 LGALS4P56470 323 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 ISL1P61371 349 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 OR2B11Q5JQS5 317 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 ABHD3Q8WU67 409 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 RCE1Q9Y256 329 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 ARL16Q0P5N6 197 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 GINS3Q9BRX5 216 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 OR51J1Q9H342 316 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 TUBAL3A6NHL2 446 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 DMRTC1Q5HYR2 192 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 LIPNQ5VXI9 398 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 BRICD5Q6PL45 260 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 SSX9Q7RTT3 188 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 SLC30A7Q8NEW0 376 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 IMMP1LQ96LU5 166 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 NUBP2Q9Y5Y2 271 aa11.5□□□□□ -0.57
PTCH1-207ENST00000429896 CD3EP07766 207 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 F2RP25116 425 aa11.49□□□□□ -0.57
PTCH1-207ENST00000429896 F2RL1P55085 397 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms