RNA–Protein interactions for RNA: ENST00000429747.5

CPNE4-201, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 4,184 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-201ENST00000429747 ZNF660Q6AZW8 331 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-201ENST00000429747 RTL6Q6ICC9 239 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ST8SIA1Q92185 356 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 EDAQ92838 391 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 SGCZQ96LD1 299 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 RSPO3Q9BXY4 272 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-201ENST00000429747 TMPRSS13Q9BYE2 586 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 FOXS1O43638 330 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 GUSBP08236 651 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 TBPP20226 339 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 CHATP28329 748 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 AFF3P51826 1226 aaKnown RBP11.31□□□□□ -0.6
CPNE4-201ENST00000429747 EFNA3P52797 238 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 PLGLB1Q02325 96 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 PPP1R3BQ86XI6 285 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ZDHHC22Q8N966 263 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 DTWD2Q8NBA8 298 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 GJC3Q8NFK1 279 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 GLYATL2Q8WU03 294 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 SHDQ96IW2 340 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ARL5BQ96KC2 179 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 C2orf50Q96LR7 162 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 CLCC1Q96S66 551 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 GABRG3Q99928 467 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ALG1L2C9J202 215 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ITGB2P05107 769 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-201ENST00000429747 RNF4P78317 190 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 SLC35A1P78382 337 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 FUT7Q11130 342 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ZNF658BQ4V348 819 aaPredicted RBP11.31□□□□□ -0.6
CPNE4-201ENST00000429747 THEM4Q5T1C6 240 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 UNQ9370/PRO34162Q6UXP9 181 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 TMEM217Q8N7C4 229 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 ARHGAP5-AS1Q96IT6 56 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 SPACA1Q9HBV2 294 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 FANCFQ9NPI8 374 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 NDRG3Q9UGV2 375 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 PADI1Q9ULC6 663 aa11.31□□□□□ -0.6
CPNE4-201ENST00000429747 A0A1W2PQF6 199 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 XRCC2O43543 280 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 SERPINE2P07093 398 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 ZNF44P15621 663 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 DCDP81605 110 aaKnown RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR9K2Q8NGE7 335 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR1S1Q8NH92 325 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 RRNAD1Q96FB5 475 aaKnown RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 FLVCR1Q9Y5Y0 555 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 TRIM77I1YAP6 450 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 PLPP3O14495 311 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 RER1O15258 196 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 NXPH3O95157 252 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 GSTP1P09211 210 aaKnown RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 SMIM10L1P0DMW3 83 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 FAHP16930 419 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 CCR5P51681 352 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 CMTM1Q8IZ96 169 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR5T1Q8NG75 326 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR1N1Q8NGS0 311 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 IL1F10Q8WWZ1 152 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 SMIM10Q96HG1 83 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR51B6Q9H340 312 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 ZNF275Q9NSD4 429 aaPredicted RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 ADAM11O75078 769 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 GLRA1P23415 457 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 OR2B8PP59922 312 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 GPR85P60893 370 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 GRB2P62993 217 aaKnown RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 RAB32Q13637 225 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 LINC01590Q5TEZ4 76 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 EMG1Q92979 244 aaKnown RBP11.3□□□□□ -0.6
CPNE4-201ENST00000429747 VN1R1Q9GZP7 353 aa11.3□□□□□ -0.6
CPNE4-201ENST00000429747 A0A087WV48 116 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 SLC37A1P57057 533 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 ZNF273Q14593 569 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 INPP5JQ15735 1006 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 RGS7BPQ6MZT1 257 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 ARRDC1Q8N5I2 433 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 CLEC1AQ8NC01 280 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 OR14K1Q8NGZ2 314 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 MVB12AQ96EY5 273 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 NPDC1Q9NQX5 325 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 LRFN1Q9P244 771 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 MRPS18BQ9Y676 258 aaKnown RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 TDRD6O60522 2096 aaKnown RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 OR6C65A6NJZ3 312 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 BCAT2O15382 392 aaPredicted RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 JTBO76095 146 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 DUS4LO95620 317 aaKnown RBP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 PNPP00491 289 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 CD1AP06126 327 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 HLA-DOBP13765 273 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 RPS11P62280 158 aaKnown RBP eCLIP11.29□□□□□ -0.6
CPNE4-201ENST00000429747 HNF4GQ14541 408 aa11.29□□□□□ -0.6
CPNE4-201ENST00000429747 RGP1Q92546 391 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms