RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 SLC36A1Q7Z2H8 476 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 TSEN54Q7Z6J9 526 aaKnown RBP12.01□□□□□ -0.49
PDAP1-202ENST00000426447 LNX2Q8N448 690 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 LY6G5BQ8NDX9 201 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 PPP1R35Q8TAP8 253 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 CFHR4Q92496 578 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 FAM46AQ96IP4 442 aaKnown RBP12.01□□□□□ -0.49
PDAP1-202ENST00000426447 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
PDAP1-202ENST00000426447 FAM234AQ9H0X4 552 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 RAB21Q9UL25 225 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 TMEM5Q9Y2B1 443 aa12.01□□□□□ -0.49
PDAP1-202ENST00000426447 DCTN6O00399 190 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 BHLHE40O14503 412 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 FFAR1O14842 300 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 PTP4A3O75365 173 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 PPP1R3DO95685 299 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 LHBP01229 141 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 HLA-DQA2P01906 255 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 MUC1P15941 1255 aaPredicted RBP12□□□□□ -0.49
PDAP1-202ENST00000426447 GRK5P34947 590 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 SAA4P35542 130 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 DLX1P56177 255 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 ZNF92Q03936 586 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 KLRD1Q13241 179 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 IKZF1Q13422 519 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 KRTAP27-1Q3LI81 207 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 TEX36Q5VZQ5 186 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 SLC18B1Q6NT16 456 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 VTCN1Q7Z7D3 282 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 PNKDQ8N490 385 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 OR2T12Q8NG77 320 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 H1FXQ92522 213 aaKnown RBP12□□□□□ -0.49
PDAP1-202ENST00000426447 SPTSSAQ969W0 71 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 SSX3Q99909 188 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 MRPL15Q9P015 296 aaKnown RBP12□□□□□ -0.49
PDAP1-202ENST00000426447 B9D1Q9UPM9 204 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 SIGLEC7Q9Y286 467 aa12□□□□□ -0.49
PDAP1-202ENST00000426447 A0A1B0GW55 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 M0R135 149 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 ZNF682O95780 498 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L2P0CJ85 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L3P0CJ86 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L4P0CJ87 422 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L5P0CJ88 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L6P0CJ89 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L7P0CJ90 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 UBE2E1P51965 193 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 LRRC10Q5BKY1 277 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 WDR38Q5JTN6 314 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4L9Q6RFH8 374 aaPredicted RBP11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DPY19L2P2Q6ZN68 376 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 FKBP9P1Q75LS8 142 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DTX3Q8N9I9 347 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 OR51G2Q8NGK0 314 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 OR8S1Q8NH09 359 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 OR2AE1Q8NHA4 323 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 LRRC29Q8WV35 223 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 R3HDM4Q96D70 268 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 ZNF799Q96GE5 643 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 TMEM120AQ9BXJ8 343 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 DUX4Q9UBX2 424 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 MAB21L2Q9Y586 359 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 N6AMT1Q9Y5N5 214 aa11.99□□□□□ -0.49
PDAP1-202ENST00000426447 IGLV1-36A0A0B4J1U3 117 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 FAM220BPB1ANY3 271 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 MPIG6BO95866 241 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 RENP00797 406 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 NPPAP01160 153 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 TROVE2P10155 538 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 ELF3P78545 371 aaPredicted RBP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 ACSM1Q08AH1 577 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 PCK2Q16822 640 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 RFX4Q33E94 735 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 SNAI3Q3KNW1 292 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 PGBD2Q6P3X8 592 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 CYP4Z1Q86W10 505 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 OR6V1Q8N148 313 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 FAM216BQ8N7L0 139 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 Q8N7P7 452 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 BEND2Q8NDZ0 799 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 SLC26A10Q8NG04 563 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 PHF21AQ96BD5 680 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 RSRC1Q96IZ7 334 aaKnown RBP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 ERMAPQ96PL5 475 aaPredicted RBP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 GPX7Q96SL4 187 aaPredicted RBP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 DCTN5Q9BTE1 182 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 MMP28Q9H239 520 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 RNPEPL1Q9HAU8 725 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 RAB18Q9NP72 206 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 ADA2Q9NZK5 511 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 PRPF19Q9UMS4 504 aaKnown RBP11.98□□□□□ -0.49
PDAP1-202ENST00000426447 PLXNB1O43157 2135 aa11.98□□□□□ -0.49
PDAP1-202ENST00000426447 ANKRD30BLA7E2S9 258 aa11.97□□□□□ -0.49
PDAP1-202ENST00000426447 FXYD1O00168 92 aa11.97□□□□□ -0.49
PDAP1-202ENST00000426447 MRASO14807 208 aa11.97□□□□□ -0.49
PDAP1-202ENST00000426447 TXNDC12O95881 172 aa11.97□□□□□ -0.49
PDAP1-202ENST00000426447 POU1F1P28069 291 aa11.97□□□□□ -0.49
PDAP1-202ENST00000426447 NAA10P41227 235 aaPredicted RBP11.97□□□□□ -0.49
PDAP1-202ENST00000426447 BLMHQ13867 455 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms