RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 SF3B4Q15427 424 aaKnown RBP eCLIP13.24□□□□□ -0.292e-17■■■■□ 23
ACTB-204ENST00000425660 GFOD2Q3B7J2 385 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 GCNT2Q8N0V5 402 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 OR51D1Q8NGF3 324 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 SYNPRQ8TBG9 265 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 BCL2L2Q92843 193 aaPredicted RBP13.24□□□□□ -0.29
ACTB-204ENST00000425660 SORCS2Q96PQ0 1159 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 C1QTNF5Q9BXJ0 243 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 PLEKHA1Q9HB21 404 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 FAIMQ9NVQ4 179 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 RHBDL2Q9NX52 303 aa13.24□□□□□ -0.29
ACTB-204ENST00000425660 MBD3L4A6NDZ8 208 aaPredicted RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 MBD3L3A6NE82 208 aaPredicted RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 MBD3L5A6NJ08 208 aaPredicted RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 C1QTNF9BB2RNN3 333 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 MAGEB3O15480 346 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 C1QTNF9P0C862 333 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 POU3F4P49335 361 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 CAPZA1P52907 286 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 C2orf76Q3KRA6 126 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 Q6ZT83 130 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 GDPD3Q7L5L3 318 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 OR5AS1Q8N127 324 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 OR52N4Q8NGI2 321 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 OR13C9Q8NGT0 318 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 OR6K3Q8NGY3 331 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 MBD3L2Q8NHZ7 208 aaPredicted RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 SSC4DQ8WTU2 575 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 PP6455Q8WZ26 134 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 EXTL1Q92935 676 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 TRIM63Q969Q1 353 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 S100A16Q96FQ6 103 aaKnown RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 BOD1Q96IK1 185 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 RNF121Q9H920 327 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 B3GNT2Q9NY97 397 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 CGGBP1Q9UFW8 167 aaPredicted RBP13.23□□□□□ -0.29
ACTB-204ENST00000425660 MED12LQ86YW9 2145 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 LDLRAD4O15165 306 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 ALDOBP05062 364 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 GABRA1P14867 456 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 PTGER4P35408 488 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 THBS4P35443 961 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 TRIQKQ629K1 86 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 UTS2BQ765I0 119 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 JAGN1Q8N5M9 183 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 PTX4Q96A99 478 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 CHST5Q9GZS9 411 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 NOX3Q9HBY0 568 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 TBCCD1Q9NVR7 557 aa13.23□□□□□ -0.29
ACTB-204ENST00000425660 LOC100509620A0A075B734 347 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 PLA2G10O15496 165 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 WDR1O75083 606 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 LCATP04180 440 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 ARSBP15848 533 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 RAB1AP62820 205 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 HACD4Q5VWC8 232 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 FAM180AQ6UWF9 173 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 SEM1Q6ZVN7 128 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 DTX3Q8N9I9 347 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 OR4D6Q8NGJ1 314 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 SPSB4Q96A44 273 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 THAP7Q9BT49 309 aaPredicted RBP13.22□□□□□ -0.29
ACTB-204ENST00000425660 CNTD2Q9H8S5 307 aa13.22□□□□□ -0.29
ACTB-204ENST00000425660 ARHGAP21Q5T5U3 1957 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 RTTNQ86VV8 2226 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 IGKV1-9A0A0C4DH69 117 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 GSTZ1O43708 216 aaPredicted RBP13.21□□□□□ -0.29
ACTB-204ENST00000425660 TNFSF13O75888 250 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 IGHV1-2P23083 117 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 RFX2P48378 723 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 PTH2RP49190 550 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 TGFBR3Q03167 851 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 ZNF585AQ6P3V2 769 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 ZNF584Q8IVC4 421 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 CCDC36Q8IYA8 594 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 Q8NA96 180 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 C19orf18Q8NEA5 215 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 RFT1Q96AA3 541 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 PLSCR4Q9NRQ2 329 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 LUZP4Q9P127 313 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
ACTB-204ENST00000425660 PTPRQQ9UMZ3 2332 aa13.21□□□□□ -0.3
ACTB-204ENST00000425660 hCG_2014768A0A024R1R8 64 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 TMEM272A0A1B0GTI8 110 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 XRCC2O43543 280 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 CTAG2O75638 210 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 CD79AP11912 226 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 COX5AP20674 150 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 CDK2P24941 298 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 STOMP27105 288 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 ZNF93P35789 620 aaPredicted RBP13.2□□□□□ -0.3
ACTB-204ENST00000425660 TNK1Q13470 666 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 TAB1Q15750 504 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 TBRG1Q3YBR2 411 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 HIKESHIQ53FT3 197 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 RTL6Q6ICC9 239 aa13.2□□□□□ -0.3
ACTB-204ENST00000425660 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms