RNA–Protein interactions for RNA: ENST00000425609.1

LINC00400-201, long intergenic non-protein coding RNA 400, humanhuman

TSL 3 BASIC

Gene LINC00400, Length 547 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00400-201ENST00000425609 MRPL22Q9NWU5 206 aaKnown RBP3.19□□□□□ -1.9
LINC00400-201ENST00000425609 ZNF226Q9NYT6 803 aa3.19□□□□□ -1.9
LINC00400-201ENST00000425609 PEF1Q9UBV8 284 aaKnown RBP3.19□□□□□ -1.9
LINC00400-201ENST00000425609 GTF3C1Q12789 2109 aa3.19□□□□□ -1.9
LINC00400-201ENST00000425609 H3BQV1 296 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 XKRYO14609 159 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CCL16O15467 120 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 B4GALT5O43286 388 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 SUPT3HO75486 399 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CTDNEP1O95476 244 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CD160O95971 181 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CLTAP09496 248 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 PSMC3P17980 439 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 U2AF2P26368 475 aaKnown RBP eCLIP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CXCL12P48061 93 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CKAP4Q07065 602 aaKnown RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TWF1Q12792 350 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TRAM2Q15035 370 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 KLHL40Q2TBA0 621 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TTLL9Q3SXZ7 439 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 HIKESHIQ53FT3 197 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TTC23LQ6PF05 361 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ALKAL1Q6UXT8 129 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 H2AFVQ71UI9 128 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CMC1Q7Z7K0 106 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TTC29Q8NA56 475 aaPredicted RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 OR56A4Q8NGH8 313 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 OR5K2Q8NHB8 316 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ITFG1Q8TB96 612 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ACTRT1Q8TDG2 376 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 DNAJC19Q96DA6 116 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ASB9Q96DX5 294 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 RNF185Q96GF1 192 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 WFIKKN1Q96NZ8 548 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ZIM3Q96PE6 472 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TSSK3Q96PN8 268 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 UCK2Q9BZX2 261 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 SLC7A5P2Q9GIP4 190 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 DMAP1Q9NPF5 467 aaPredicted RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 KCNJ16Q9NPI9 418 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 DDX19AQ9NUU7 478 aaKnown RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 STOX2Q9P2F5 926 aaPredicted RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 NUFIP1Q9UHK0 495 aaKnown RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 ST3GAL6Q9Y274 331 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 CHTOPQ9Y3Y2 248 aaKnown RBP3.18□□□□□ -1.9
LINC00400-201ENST00000425609 KMT2EQ8IZD2 1858 aa3.18□□□□□ -1.9
LINC00400-201ENST00000425609 TTC28Q96AY4 2481 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ATG2AQ2TAZ0 1938 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 PLAC8L1A1L4L8 177 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 LYRM9A8MSI8 78 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 A8MU10 97 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 H0YC42 278 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 K7EMT4 169 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ICOSLGO75144 302 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CCNB2O95067 398 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 RETP07949 1114 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ZDHHC11BP0C7U3 371 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CT45A6P0DMU7 189 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CT45A5P0DMU8 189 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CT45A7P0DMV0 189 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CTRB1P17538 263 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 OR1E1P30953 314 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 HOXA6P31267 233 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ARPP19P56211 112 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 EIF3EP60228 445 aaKnown RBP3.17□□□□□ -1.9
LINC00400-201ENST00000425609 KRTAP10-5P60370 271 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 STXBP1P61764 594 aaKnown RBP3.17□□□□□ -1.9
LINC00400-201ENST00000425609 SLC7A9P82251 487 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 DOC2AQ14183 400 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 OR7A5Q15622 319 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 RSPO1Q2MKA7 263 aaPredicted RBP3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CT45A1Q5HYN5 189 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ANKRD22Q5VYY1 191 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 PLCXD3Q63HM9 321 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 STUMQ69YW2 141 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 SPESP1Q6UW49 350 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 MREGQ8N565 214 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 OR2A1Q8NGT9 310 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CT45A3Q8NHU0 189 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 SPPL2BQ8TCT7 592 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 BLOC1S5Q8TDH9 187 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 CD300LFQ8TDQ1 290 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 FAM3DQ96BQ1 224 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 COL21A1Q96P44 957 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ASB7Q9H672 318 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 ADAM22Q9P0K1 906 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 DEC1Q9P2X7 70 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 RPS6KB2Q9UBS0 482 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 PCYOX1Q9UHG3 505 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 MRPS18BQ9Y676 258 aaKnown RBP3.17□□□□□ -1.9
LINC00400-201ENST00000425609 SCN2AQ99250 2005 aa3.17□□□□□ -1.9
LINC00400-201ENST00000425609 DENND4AQ7Z401 1863 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 IGHV3-64DA0A0J9YX35 117 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 A0A1B0GW55 424 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 PRSS37A4D1T9 235 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 SMKR1H3BMG3 65 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 M0R3G1 203 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 SLC16A4O15374 487 aa3.16□□□□□ -1.9
LINC00400-201ENST00000425609 NUPL2O15504 423 aaKnown RBP3.16□□□□□ -1.9
LINC00400-201ENST00000425609 FKBP6O75344 327 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms