RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 A6NIZ1 184 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 P2RY10O00398 339 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 NPIPB7O75200 414 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF735P0CB33 412 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 STARD6P59095 220 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 RAP1BP61224 184 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 RAP1AP62834 184 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 SLC22A6Q4U2R8 563 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 GUSBP11Q6P575 273 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
COL12A1-205ENST00000425443 COX15Q7KZN9 410 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 RABEPKQ7Z6M1 372 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF441Q8N8Z8 693 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 ASB5Q8WWX0 329 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 HLA-CQ95604 372 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 CCDC74BQ96LY2 380 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 WNT16Q9UBV4 365 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 LHX6Q9UPM6 363 aa11.57□□□□□ -0.56
COL12A1-205ENST00000425443 LOC100289279A0A1B0GTE1 492 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 SLC17A2O00624 439 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 HTR2CP28335 458 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 DAP3P51398 398 aaKnown RBP11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ELP2Q6IA86 826 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 RAB11FIP2Q7L804 512 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 OR52N5Q8NH56 324 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF75AQ96N20 296 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ADAT1Q9BUB4 502 aaKnown RBP11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ALX4Q9H161 411 aaPredicted RBP11.56□□□□□ -0.56
COL12A1-205ENST00000425443 C1orf198Q9H425 327 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 KLK13Q9UKR3 277 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 PI4KAP42356 2102 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ANKUB1A6NFN9 424 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 TIAF1O95411 115 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 HCKP08631 526 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 SLC2A1P11166 492 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 DCDP81605 110 aaKnown RBP11.56□□□□□ -0.56
COL12A1-205ENST00000425443 NAXDQ8IW45 347 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 APCDD1LQ8NCL9 501 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 OR5T2Q8NGG2 359 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 ST8SIA1Q92185 356 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 MRGPRFQ96AM1 343 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 POLR1DQ9Y2S0 133 aa11.56□□□□□ -0.56
COL12A1-205ENST00000425443 IGKV1D-43A0A0B4J1Z2 117 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 TMEM269A0A1B0GVZ9 245 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF354AO60765 605 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 IFNA4P05014 189 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 H2BFMP0C1H6 154 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 C4BPBP20851 252 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 APOBEC1P41238 236 aaKnown RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 FOXF1Q12946 379 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 SNTB1Q13884 538 aaKnown RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 PHF19Q5T6S3 580 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 ATPAF1Q5TC12 328 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 OR52W1Q6IF63 320 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 OR5L2Q8NGL0 311 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 CASTOR1Q8WTX7 329 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 ZNF845Q96IR2 970 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 GPR61Q9BZJ8 451 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 BARX1Q9HBU1 254 aaPredicted RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 DNAJB11Q9UBS4 358 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 PLEKHA6Q9Y2H5 1048 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 RALGAPA1Q6GYQ0 2036 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 LOC107986453A0A1B0GWG9 222 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 A0A1W2PPC1 479 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 GIMD1P0DJR0 217 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 TEX30Q5JUR7 227 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 GVQW1Q8N7I0 195 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 STEAP2Q8NFT2 490 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 OR13C8Q8NGS7 320 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 OR6K3Q8NGY3 331 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 SLC6A7Q99884 636 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 FSCN3Q9NQT6 498 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 LUZP4Q9P127 313 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 HHLA2Q9UM44 414 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 CACNA1EQ15878 2313 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 TMEM82A0PJX8 343 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 RFPL4AA6NLU0 287 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 RFPL4AL1F8VTS6 287 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 CYB5AP00167 134 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 RPA2P15927 270 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 CFPP27918 469 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 HSF1Q00613 529 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 LYSMD4Q5XG99 296 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 CARD17Q5XLA6 110 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 FAM219AQ8IW50 185 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 PDZD9Q8IXQ8 264 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 LRRC46Q96FV0 321 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 EDEM2Q9BV94 578 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 SEC61A2Q9H9S3 476 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 TAS2R8Q9NYW2 309 aa11.55□□□□□ -0.56
COL12A1-205ENST00000425443 NOP16Q9Y3C1 178 aaKnown RBP11.55□□□□□ -0.56
COL12A1-205ENST00000425443 MS4A18H0YCH9 400 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 PTGFRP43088 359 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 BIDP55957 195 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 CCL7P80098 99 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 TAF13Q15543 124 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 MS4A18Q3C1V0 323 aa11.54□□□□□ -0.56
COL12A1-205ENST00000425443 CDNFQ49AH0 187 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms