RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 TPTEP56180 551 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 ELF3P78545 371 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-209ENST00000425239 POU4F2Q12837 409 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 TAF9Q16594 264 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 PCK2Q16822 640 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 SLC36A3Q495N2 470 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 GLYATL3Q5SZD4 288 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 DUX4L9Q6RFH8 374 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-209ENST00000425239 Q6ZSV7 163 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 PNLDC1Q8NA58 520 aaKnown RBP12.34□□□□□ -0.43
ATG4B-209ENST00000425239 SDR9C7Q8NEX9 313 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 OR2AJ1Q8NGZ0 328 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 TBC1D15Q8TC07 691 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 LHX4Q969G2 390 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 ZNF799Q96GE5 643 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 CCT8L2Q96SF2 557 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 KCTD14Q9BQ13 255 aaPredicted RBP12.34□□□□□ -0.43
ATG4B-209ENST00000425239 TRIM15Q9C019 465 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 C16orf95Q9H693 158 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 CCDC134Q9H6E4 229 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 C1orf123Q9NWV4 160 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 DUX4Q9UBX2 424 aa12.34□□□□□ -0.43
ATG4B-209ENST00000425239 FAM32AQ9Y421 112 aaKnown RBP12.34□□□□□ -0.43
ATG4B-209ENST00000425239 TRAV38-1A0A0B4J264 116 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-209ENST00000425239 M0QZ24 198 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 TIMM23O14925 209 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 OR10H3O60404 316 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 RENP00797 406 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 GYPAP02724 150 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 KCNJ8Q15842 424 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 METTL11BQ5VVY1 283 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 LYPD4Q6UWN0 246 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 MRPL21Q7Z2W9 205 aaKnown RBP12.33□□□□□ -0.44
ATG4B-209ENST00000425239 FANK1Q8TC84 345 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 SPSB4Q96A44 273 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 ADAT1Q9BUB4 502 aaKnown RBP12.33□□□□□ -0.44
ATG4B-209ENST00000425239 MMADHCQ9H3L0 296 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-209ENST00000425239 CNTD2Q9H8S5 307 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 GORASP2Q9H8Y8 452 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 KCNG2Q9UJ96 466 aa12.33□□□□□ -0.44
ATG4B-209ENST00000425239 RPUSD1Q9UJJ7 312 aaKnown RBP12.33□□□□□ -0.44
ATG4B-209ENST00000425239 BHLHE40O14503 412 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 TSPAN15O95858 294 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 ECDO95905 644 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-209ENST00000425239 PSME3P61289 254 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 OR8B8Q15620 311 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 CDONQ4KMG0 1287 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 METAP1DQ6UB28 335 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-209ENST00000425239 DRAM2Q6UX65 266 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 Q8N7P7 452 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 BOLLQ8N9W6 283 aaKnown RBP12.32□□□□□ -0.44
ATG4B-209ENST00000425239 SPERTQ8NA61 448 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 PYURFQ96I23 114 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 PKP2Q99959 881 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 IFT27Q9BW83 186 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 PPP1R3EQ9H7J1 279 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 TRIM36Q9NQ86 728 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 KPTNQ9Y664 436 aa12.32□□□□□ -0.44
ATG4B-209ENST00000425239 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SLC22A31A6NKX4 558 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 NDUFAB1O14561 156 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 TSPAN9O75954 239 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 GADD45GO95257 159 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 GRPP07492 148 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 NOS3P29474 1203 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 PYCR1P32322 319 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SLC35F1Q5T1Q4 408 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 PRSS45Q7RTY3 260 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 VMO1Q7Z5L0 202 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 PDZD9Q8IXQ8 264 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 TNFRSF14Q92956 283 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SPTSSAQ969W0 71 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SEH1LQ96EE3 360 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 DMRTB1Q96MA1 342 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 MYLK2Q9H1R3 596 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SEMA6AQ9H2E6 1030 aa12.31□□□□□ -0.44
ATG4B-209ENST00000425239 KRCC1Q9NPI7 259 aaPredicted RBP12.31□□□□□ -0.44
ATG4B-209ENST00000425239 SAMD4AQ9UPU9 718 aaKnown RBP12.31□□□□□ -0.44
ATG4B-209ENST00000425239 NOP16Q9Y3C1 178 aaKnown RBP12.31□□□□□ -0.44
ATG4B-209ENST00000425239 GGT3PA6NGU5 568 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 TVP23AA6NH52 213 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 RNASEK-C17orf49H0YIS7 233 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 HLA-DQA2P01906 255 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 TGM4P49221 684 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 NUDT2P50583 147 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 HMGA2P52926 109 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 FAM3AP98173 230 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 TSPAN31Q12999 210 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 KLHL12Q53G59 568 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 PGBD2Q6P3X8 592 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 RNF148Q8N7C7 305 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 CYB561A3Q8NBI2 242 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 OR56B2PQ8NGI1 322 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 SGK3Q96BR1 496 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 KCNJ15Q99712 375 aa12.3□□□□□ -0.44
ATG4B-209ENST00000425239 NMNAT2Q9BZQ4 307 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms