RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 MVB12AQ96EY5 273 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 SNX22Q96L94 193 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 C4orf45Q96LM5 186 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 GNRHR2Q96P88 292 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 NELFAQ9H3P2 528 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 PTGES2Q9H7Z7 377 aa10.08□□□□□ -0.8
SEC61A1-202ENST00000424880 A0A0A6YYH2 397 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 A6NJ64 397 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 LRG1P02750 347 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 FCGR2CP31995 323 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 SNCAP37840 140 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 GNALP38405 381 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 GABRA4P48169 554 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 CAMLGP49069 296 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 CCL20P78556 96 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 NHLH2Q02577 135 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 PDGFRLQ15198 375 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 HAGHQ16775 308 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM184AQ6ZMB5 413 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 C19orf47Q8N9M1 422 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 OR2L3Q8NG85 312 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 WFIKKN2Q8TEU8 576 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ABHD14AQ9BUJ0 271 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 DNAJB12Q9NXW2 375 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 LRIT1Q9P2V4 623 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 RAB22AQ9UL26 194 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 MED12Q93074 2177 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM212A6NML5 194 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 GEMIN2O14893 280 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 CNOT4O95628 575 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 IL2RAP01589 272 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ALOX5APP20292 161 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 C5AR1P21730 350 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 PEBP1P30086 187 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 SULT1A2P50226 295 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 TLE1Q04724 770 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 TOMM34Q15785 309 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ZIC1Q15915 447 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ITPRIPL2Q3MIP1 535 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 NKAIN1Q4KMZ8 207 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ALG10Q5BKT4 473 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 METRNLQ641Q3 311 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 PRSS54Q6PEW0 395 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 DPY19L2P2Q6ZN68 376 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 P4HA3Q7Z4N8 544 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 OR1J1Q8NGS3 322 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 OR4K15Q8NH41 348 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ASB5Q8WWX0 329 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 REEP6Q96HR9 211 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ST6GALNAC5Q9BVH7 336 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 NMNAT2Q9BZQ4 307 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 WNT5BQ9H1J7 359 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 GRHPRQ9UBQ7 328 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 YBX2Q9Y2T7 364 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 IGLON5A6NGN9 336 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 RAB27BO00194 218 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 SCAF4O95104 1147 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 RPL12P30050 165 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ARRB1P49407 418 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 HSD17B7P56937 341 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 SCAND1P57086 179 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 GPR18Q14330 331 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 CLEC12BQ2HXU8 276 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 TCEAL5Q5H9L2 206 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 C1QL3Q5VWW1 255 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 METTL27Q8N6F8 245 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 BEND2Q8NDZ0 799 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 OR10AD1Q8NGE0 317 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 OR52R1Q8NGF1 315 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 IRF7Q92985 503 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 BANF2Q9H503 90 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 MBNL1Q9NR56 388 aaKnown RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 EMC9Q9Y3B6 208 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 HDGFL3Q9Y3E1 203 aa10.07□□□□□ -0.8
SEC61A1-202ENST00000424880 FRYQ5TBA9 3013 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 SEC16AO15027 2179 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 SEC14L6B5MCN3 397 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 K7EPK0 472 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 BRINP1O60477 761 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 WISP1O95388 367 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 HEXBP07686 556 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 TAGLN2P37802 199 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 DNASE1L1P49184 302 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 RAB28P51157 221 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 SUPT4H1P63272 117 aaKnown RBP10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 ZP2Q05996 745 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 TMEM35AQ53FP2 167 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 MESTQ5EB52 335 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 VN1R4Q7Z5H5 301 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 SPRED2Q7Z698 418 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF595Q8IYB9 648 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 FAM71E2Q8N5Q1 922 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 ZNF610Q8N9Z0 462 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 WFIKKN1Q96NZ8 548 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 ZBP1Q9H171 429 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 CNTD2Q9H8S5 307 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 HSF4Q9ULV5 492 aa10.06□□□□□ -0.8
SEC61A1-202ENST00000424880 SLCO1B1Q9Y6L6 691 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms