RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 DACT3Q96B18 629 aaPredicted RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 HAVCR1Q96D42 359 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 DUS3LQ96G46 650 aaKnown RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZNF582Q96NG8 517 aaPredicted RBP10.89□□□□□ -0.67
VRK3-203ENST00000424804 DIRC2Q96SL1 478 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 C1QTNF5Q9BXJ0 243 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 PRRG3Q9BZD7 231 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 RIBC2Q9H4K1 309 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 BRD7Q9NPI1 651 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 TUBG2Q9NRH3 451 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 ZNF69Q9UC07 566 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 OAZ3Q9UMX2 235 aa10.89□□□□□ -0.67
VRK3-203ENST00000424804 A8MXK9 166 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 J3QW42 95 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 H2BFMP0C1H6 154 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 SBK2P0C263 348 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 CX3CR1P49238 355 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 ACTR3P61158 418 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 ESRRGP62508 458 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 SLC3A1Q07837 685 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 GFOD2Q3B7J2 385 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 SNAI3Q3KNW1 292 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 TMEM155Q4W5P6 130 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 PGAP1Q75T13 922 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 SHFQ7M4L6 423 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.88□□□□□ -0.67
VRK3-203ENST00000424804 C3orf56Q8N813 242 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 TCEANCQ8N8B7 351 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 ITLN1Q8WWA0 313 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 CENPNQ96H22 339 aaPredicted RBP10.88□□□□□ -0.67
VRK3-203ENST00000424804 JMJD8Q96S16 334 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 KCNJ15Q99712 375 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 CIB1Q99828 191 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 PKP2Q99959 881 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 ABHD6Q9BV23 337 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 TTTY10Q9BZA0 68 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 UBAP1Q9NZ09 502 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 H2AFY2Q9P0M6 372 aaPredicted RBP10.88□□□□□ -0.67
VRK3-203ENST00000424804 INSIG2Q9Y5U4 225 aa10.88□□□□□ -0.67
VRK3-203ENST00000424804 SOX21Q9Y651 276 aaPredicted RBP10.88□□□□□ -0.67
VRK3-203ENST00000424804 GGT3PA6NGU5 568 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 H0YL77 283 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 PRODHO43272 600 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 PRKYO43930 277 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 FOXH1O75593 365 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 LYNP07948 512 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 WNT2P09544 360 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 HKR1P10072 659 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 SELEP16581 610 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 EPHA2P29317 976 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 SLC15A1P46059 708 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 HCCSP53701 268 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 PAX8Q06710 450 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 ZNF154Q13106 437 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 GK2Q14410 553 aaPredicted RBP10.87□□□□□ -0.67
VRK3-203ENST00000424804 TEX30Q5JUR7 227 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 LCN1P1Q5VSP4 162 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 KDM4DQ6B0I6 523 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 FBXW12Q6X9E4 464 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 DOK3Q7L591 496 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 BCDIN3DQ7Z5W3 292 aaKnown RBP10.87□□□□□ -0.67
VRK3-203ENST00000424804 TIGD4Q8IY51 512 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 PARP8Q8N3A8 854 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 SIGLECL1Q8N7X8 197 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 OR8G5Q8NG78 346 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 SGMS2Q8NHU3 365 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 ST7LQ8TDW4 575 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 SPRYD4Q8WW59 207 aaPredicted RBP10.87□□□□□ -0.67
VRK3-203ENST00000424804 RAB3IPQ96QF0 476 aaPredicted RBP10.87□□□□□ -0.67
VRK3-203ENST00000424804 OR2V2Q96R30 315 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 IL4I1Q96RQ9 567 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 AMELYQ99218 206 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 ZNF747Q9BV97 191 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 GABARAPL1Q9H0R8 117 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 DDX28Q9NUL7 540 aaKnown RBP10.87□□□□□ -0.67
VRK3-203ENST00000424804 IL19Q9UHD0 177 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 ENOPH1Q9UHY7 261 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 PPIAL4AQ9Y536 164 aa10.87□□□□□ -0.67
VRK3-203ENST00000424804 A0A1B0GWJ7 208 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 C5orf63A6NC05 138 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 TMEM178BH3BS89 294 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 KCNAB3O43448 404 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 HLA-DPB1P04440 258 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 TNFRSF1AP19438 455 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 ANOS1P23352 680 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 CD80P33681 288 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 PMELP40967 661 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 RAD23AP54725 363 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 BTG1P62324 171 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 GRB2P62993 217 aaKnown RBP10.86□□□□□ -0.67
VRK3-203ENST00000424804 ZNF92Q03936 586 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 TIGD6Q17RP2 521 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 KRTAP27-1Q3LI81 207 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 SLC35D3Q5M8T2 416 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 GLYATL3Q5SZD4 288 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 SLX4IPQ5VYV7 408 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 FAM57BQ71RH2 274 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms