RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 ARHGAP24Q8N264 748 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 AQP11Q8NBQ7 271 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 OR2T33Q8NG76 320 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 OR56B2PQ8NGI1 322 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 OR51L1Q8NGJ5 315 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 SLAMF6Q96DU3 332 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TECTBQ96PL2 329 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 KCNJ15Q99712 375 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TSSK6Q9BXA6 273 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 DGCR6LQ9BY27 220 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 NMNAT2Q9BZQ4 307 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 C14orf119Q9NWQ9 140 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 ERVK-18Q9QC07 812 aa9.62□□□□□ -0.87
SQSTM1-203ENST00000422245 TRAV38-1A0A0B4J264 116 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 OOEPA6NGQ2 149 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 A6NLC8 198 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 RIIAD1A6NNX1 92 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 POM121CA8CG34 1229 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 NDUFA2O43678 99 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 GASTP01350 101 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF3P17036 446 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 DDOSTP39656 456 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 SLC15A1P46059 708 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 PRKXP51817 358 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 GRB2P62993 217 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 GK3PQ14409 553 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 OR8B8Q15620 311 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF362Q5T0B9 420 aaPredicted RBP9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 LCN8Q6JVE9 175 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 LYPD2Q6UXB3 125 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 PIGWQ7Z7B1 504 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 C19orf18Q8NEA5 215 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 OR6K6Q8NGW6 343 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNRF4Q8WWF5 429 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 SPSB4Q96A44 273 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 TOR3AQ9H497 397 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 PRDM13Q9H4Q3 707 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF696Q9H7X3 374 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 REEP1Q9H902 201 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 SP140LQ9H930 580 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 UNKLQ9H9P5 680 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 CENPMQ9NSP4 180 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 ARMC1Q9NVT9 282 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 C1orf123Q9NWV4 160 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 CTSZQ9UBR2 303 aa9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 SAMHD1Q9Y3Z3 626 aaKnown RBP9.61□□□□□ -0.87
SQSTM1-203ENST00000422245 hCG_1807616A0A1W2PRN6 198 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 TCRBV5S2A0A599 114 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 DHRS12A0PJE2 317 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 C5orf63A6NC05 138 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ANKRD30BLA7E2S9 258 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF879B4DU55 563 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 C3orf80F5H4A9 247 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 P2RY10O00398 339 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF593O00488 134 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ADAM20O43506 726 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 SOX14O95416 240 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 GYPBP06028 91 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 LIPFP07098 398 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 SLC2A1P11166 492 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ANOS1P23352 680 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 CFL1P23528 166 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 CFHR2P36980 270 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 MICAQ29983 383 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 C11orf91Q3C1V1 193 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 FAM98BQ52LJ0 330 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 SFRP4Q6FHJ7 346 aaPredicted RBP9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 OR2T5Q6IEZ7 315 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 BRD3OSQ6XYD6 125 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 SPATC1Q76KD6 591 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 DHFR2Q86XF0 187 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 BOLLQ8N9W6 283 aaKnown RBP9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 OR2T29Q8NH02 315 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 OR4Q3Q8NH05 313 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 TEX47Q8TBZ9 253 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 ZDHHC16Q969W1 377 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 NOX4Q9NPH5 578 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 CMC2Q9NRP2 79 aa9.6□□□□□ -0.87
SQSTM1-203ENST00000422245 MDFIC2A0A1B0GVS7 189 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 SRRM5B3KS81 715 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 HOXA3O43365 443 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 TBX1O43435 398 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 APOC1P02654 83 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 ANXA2P07355 339 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 HSD11B1P28845 292 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 GRK5P34947 590 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 CX3CR1P49238 355 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 EIF2B1Q14232 305 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 SNCBQ16143 134 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 TIGD6Q17RP2 521 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 DEFB112Q30KQ8 113 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 METTL11BQ5VVY1 283 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 C16orf87Q6PH81 154 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 CD300LDQ6UXZ3 194 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 FAM90A1Q86YD7 464 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 TMEM86BQ8N661 226 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 PNLDC1Q8NA58 520 aaKnown RBP9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 OR10G2Q8NGC3 310 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 OR52H1Q8NGJ2 320 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms