RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 DCTDP32321 178 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 ACTC1P68032 377 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 ACTA1P68133 377 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 IL18R1Q13478 541 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 OR8G1Q15617 311 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 HFEQ30201 348 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 PLEKHG7Q6ZR37 379 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 FAM220AQ7Z4H9 259 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 C8orf59Q8N0T1 100 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-202ENST00000421712 ACBD7Q8N6N7 88 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 OR10AD1Q8NGE0 317 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 OR8B12Q8NGG6 310 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 OR56B2PQ8NGI1 322 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 CNIH3Q8TBE1 160 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 APH1BQ8WW43 257 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 CCL17Q92583 94 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 SPSB4Q96A44 273 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 LGALS12Q96DT0 336 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 MRPL48Q96GC5 212 aaKnown RBP13.39□□□□□ -0.27
BRAT1-202ENST00000421712 SLC30A2Q9BRI3 323 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 PBOV1Q9GZY1 135 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 RGCCQ9H4X1 137 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 CHODLQ9H9P2 273 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 DLL4Q9NR61 685 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 MRM2Q9UI43 246 aaKnown RBP13.39□□□□□ -0.27
BRAT1-202ENST00000421712 GNG8Q9UK08 70 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 MED13LQ71F56 2210 aa13.39□□□□□ -0.27
BRAT1-202ENST00000421712 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 H0YL77 283 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 PPIHO43447 177 aaKnown RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 ATP6V1G2O95670 118 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 FADS2O95864 444 aaKnown RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 TNFRSF1AP19438 455 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 ACHEP22303 614 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 CA6P23280 308 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 DDOSTP39656 456 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 NR4A2P43354 598 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 FAM3AP98173 230 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 ZNF85Q03923 595 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 SMN1Q16637 294 aaKnown RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 KLHL22Q53GT1 634 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 ITLN1Q8WWA0 313 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 YIPF5Q969M3 257 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 OR2V2Q96R30 315 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 BPESC1Q9GZL8 116 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 SLC22A4Q9H015 551 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 ZNF275Q9NSD4 429 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 FAM206AQ9NX38 181 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 IL19Q9UHD0 177 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 EXOGQ9Y2C4 368 aaKnown RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 NOP16Q9Y3C1 178 aaKnown RBP13.38□□□□□ -0.27
BRAT1-202ENST00000421712 SNX5Q9Y5X3 404 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 R4GMQ9 66 aa13.38□□□□□ -0.27
BRAT1-202ENST00000421712 IGHV3-64DA0A0J9YX35 117 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 F5H5P2 479 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 WBP4O75554 376 aaKnown RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 SULT1C4O75897 302 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 CD55P08174 381 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 ADH4P08319 380 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 TACSTD2P09758 323 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 FOSL1P15407 271 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 USF1P22415 310 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 CRYBB2P43320 205 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 GPR6P46095 362 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 SRP9P49458 86 aaKnown RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 GSK3AP49840 483 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 MMP16P51512 607 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 AQP4P55087 323 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 MRPS11P82912 194 aaKnown RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 RAB40BQ12829 278 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 TP53I3Q53FA7 332 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 C6orf52Q5T4I8 152 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 BCL2L15Q5TBC7 163 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 LIPNQ5VXI9 398 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 LHFPL3Q86UP9 236 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 SIGLEC11Q96RL6 698 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 MYCBPQ99417 103 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-202ENST00000421712 ZNF391Q9UJN7 358 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 OR52A1Q9UKL2 312 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 HSPE1-MOB4S4R3N1 261 aa13.37□□□□□ -0.27
BRAT1-202ENST00000421712 hCG_38984A0A1B0GV85 526 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 J3QLW9 94 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 MLNRO43193 412 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 PNPP00491 289 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 GNAO1P09471 354 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 ZNF19P17023 458 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 GIFP27352 417 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 GNALP38405 381 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 TMEM33P57088 247 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 ISL1P61371 349 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 RIPK1Q13546 671 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 SPRNQ5BIV9 151 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 CSNK2A3Q8NEV1 391 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 OR52I1Q8NGK6 324 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 OR51E1Q8TCB6 317 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 TFAP2CQ92754 450 aa13.36□□□□□ -0.27
BRAT1-202ENST00000421712 FAM71F1Q96KD3 344 aaPredicted RBP13.36□□□□□ -0.27
BRAT1-202ENST00000421712 COX4I2Q96KJ9 171 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms