RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 FRYQ5TBA9 3013 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 A0A1B0GTI1 187 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 TGM6O95932 706 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ONECUT2O95948 504 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 FAHP16930 419 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 MSR1P21757 451 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ADH6P28332 368 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 LRRC37A5PQ49AS3 106 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 SEZ6L2Q6UXD5 910 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 SLC38A6Q8IZM9 456 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CLEC1AQ8NC01 280 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 GPX8Q8TED1 209 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 RNF138Q8WVD3 245 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PIGTQ969N2 578 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PIGQQ9BRB3 760 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 NAA11Q9BSU3 229 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 HEXA-AS1Q9H8Q6 139 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PLA2G3Q9NZ20 509 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 PTTG3PQ9NZH4 202 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 MRPS28Q9Y2Q9 187 aaKnown RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 COL5A1P20908 1838 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 SPTBN2O15020 2390 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ARPC5O15511 151 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 DHHO43323 396 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ZNF35P13682 527 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 TAS2R19P59542 299 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 B2MP61769 119 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CSNK2A1P68400 391 aaPredicted RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 UNC119Q13432 240 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 DHRS13Q6UX07 377 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 HDDC2Q7Z4H3 204 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 OR2AE1Q8NHA4 323 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ANGPTL6Q8NI99 470 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 CASTOR1Q8WTX7 329 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 ZC3H10Q96K80 434 aaKnown RBP9.66□□□□□ -0.86
DDX56-203ENST00000421223 CRLF2Q9HC73 371 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 KLK13Q9UKR3 277 aa9.66□□□□□ -0.86
DDX56-203ENST00000421223 EXPH5Q8NEV8 1989 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 NPIPB13A6NJU9 1138 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 NPIPB4C9JG80 1138 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 ETV2O00321 342 aaPredicted RBP9.65□□□□□ -0.86
DDX56-203ENST00000421223 TPOP07202 933 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 B4GALT1P15291 398 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 FSTP19883 344 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 IKZF1Q13422 519 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 GRK1Q15835 563 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 RNASE10Q5GAN6 216 aaKnown RBP9.65□□□□□ -0.86
DDX56-203ENST00000421223 TEX261Q6UWH6 196 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 PAQR4Q8N4S7 273 aaPredicted RBP9.65□□□□□ -0.86
DDX56-203ENST00000421223 NKAIN3Q8N8D7 197 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 MAFIPQ8WZ33 124 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 SLC6A7Q99884 636 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 HES7Q9BYE0 225 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 STRADBQ9C0K7 418 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 B3GNT2Q9NY97 397 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 RAB22AQ9UL26 194 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 U3KQ87 197 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 RIF1Q5UIP0 2472 aaKnown RBP9.65□□□□□ -0.86
DDX56-203ENST00000421223 TMEM82A0PJX8 343 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 SLC22A5O76082 557 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 PMP2P02689 132 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 IFNA6P05013 189 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 VAMP1P23763 118 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 ITGA3P26006 1051 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 CYB561P49447 251 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 ARFRP1Q13795 201 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 SFRP5Q5T4F7 317 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 CDH24Q86UP0 819 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 FAM109AQ8N4B1 249 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 ZNF845Q96IR2 970 aaPredicted RBP9.65□□□□□ -0.86
DDX56-203ENST00000421223 FOXJ2Q9P0K8 574 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 NPTNQ9Y639 398 aa9.65□□□□□ -0.86
DDX56-203ENST00000421223 ZSCAN5BA6NJL1 495 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 LEUTXA8MZ59 168 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 STMND1H3BQB6 276 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 RAB27BO00194 218 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 CCSO14618 274 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 SOCS1O15524 211 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 EIF1BO60739 113 aaKnown RBP9.64□□□□□ -0.87
DDX56-203ENST00000421223 TMEM127O75204 238 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 CCNOP22674 350 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 RAC1P63000 192 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 ATXN7L3Q14CW9 347 aaPredicted RBP9.64□□□□□ -0.87
DDX56-203ENST00000421223 DCAF12L2Q5VW00 463 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 ZNF626Q68DY1 528 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 LURAP1LQ8IV03 231 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 BATF2Q8N1L9 274 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 ZNF680Q8NEM1 530 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 GJC3Q8NFK1 279 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 AKR7LQ8NHP1 331 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 FOXRED1Q96CU9 486 aaPredicted RBP9.64□□□□□ -0.87
DDX56-203ENST00000421223 SEC22AQ96IW7 307 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 DEPPQ9NTK1 212 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 LRFN1Q9P244 771 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 MED13Q9UHV7 2174 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 A0A087WZY1 265 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 CCDC187A0A096LP49 1063 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 FAM166BA8MTA8 275 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 L7N2F9 121 aa9.64□□□□□ -0.87
DDX56-203ENST00000421223 M0R233 179 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms