RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 FN3KQ9H479 309 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 HINT3Q9NQE9 182 aaKnown RBP5.89□□□□□ -1.47
HMGN1-205ENST00000419378 SLCO1C1Q9NYB5 712 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 PLEK2Q9NYT0 353 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 IL20Q9NYY1 176 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 TAAR3PQ9P1P4 343 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 DNAJB11Q9UBS4 358 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 ATPIF1Q9UII2 106 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 B9D1Q9UPM9 204 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 POMPQ9Y244 141 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 POLR1DQ9Y2S0 133 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 LHFPL6Q9Y693 200 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 ABCA2Q9BZC7 2435 aa5.89□□□□□ -1.47
HMGN1-205ENST00000419378 CUBNO60494 3623 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TCRBV3S1A0A5B6 114 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ARRDC5A6NEK1 342 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 C17orf100A8MU93 164 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 H3BSA7 217 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 RER1O15258 196 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TLX2O43763 284 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-205ENST00000419378 FKBP6O75344 327 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 SOX14O95416 240 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 IGHV3-13P01766 116 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TFP02787 698 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 IGHV4-31P0DP07 118 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 EGR2P11161 476 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-205ENST00000419378 HOXB6P17509 224 aaKnown RBP5.88□□□□□ -1.47
HMGN1-205ENST00000419378 GSTM3P21266 225 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 GIFP27352 417 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 GCH1P30793 250 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 GGT2P36268 569 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 MAGEB1P43366 347 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 MMP15P51511 669 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ARHGDIAP52565 204 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 HIST1H3AP68431 136 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 COX10Q12887 443 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 PCGF3Q3KNV8 242 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 KRTAP21-3Q3LHN1 58 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF718Q3SXZ3 478 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 C6orf52Q5T4I8 152 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 HIST2H3PS2Q5TEC6 136 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM154Q6P9G4 183 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 CORO6Q6QEF8 472 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ARL9Q6T311 187 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 HIST2H3AQ71DI3 136 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TMEM179BQ7Z7N9 219 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 LINC00346Q8IVM7 164 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 C1orf174Q8IYL3 243 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 CYB561A3Q8NBI2 242 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 NPEPL1Q8NDH3 523 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF540Q8NDQ6 660 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 OR2T33Q8NG76 320 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 OR2T4Q8NH00 348 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 OR4Q3Q8NH05 313 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 OR1F12Q8NHA8 337 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 KLF14Q8TD94 323 aaPredicted RBP5.88□□□□□ -1.47
HMGN1-205ENST00000419378 SLC7A6Q92536 515 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 YIPF5Q969M3 257 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 FEVQ99581 238 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 NIPSNAP1Q9BPW8 284 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 TSSK6Q9BXA6 273 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 CADM1Q9BY67 442 aaKnown RBP5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ELOVL3Q9HB03 270 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 YAE1D1Q9NRH1 226 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 ARMC1Q9NVT9 282 aa5.88□□□□□ -1.47
HMGN1-205ENST00000419378 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.88□□□□□ -1.474e-11■■■■■ 27.5
HMGN1-205ENST00000419378 PLSCR5A0PG75 271 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ZSCAN5BA6NJL1 495 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 GNGT2O14610 69 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 E2F6O75461 281 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CRLF1O75462 422 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 RP2O75695 350 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 TNFRSF6BO95407 300 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 IGHV1-46P01743 117 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 HLA-DQA2P01906 255 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 TACSTD2P09758 323 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF23P17027 643 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ACHEP22303 614 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 PYCR1P32322 319 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ERFP50548 548 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CCL8P80075 99 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 MRPS11P82912 194 aaKnown RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CRMP1Q14194 572 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 TRIP10Q15642 601 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 MOGQ16653 247 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 SLC36A3Q495N2 470 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 ZNF362Q5T0B9 420 aaPredicted RBP5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CYB5R2Q6BCY4 276 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 SLC18B1Q6NT16 456 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 CFAP77Q6ZQR2 320 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 IZUMO1Q8IYV9 350 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 HS3ST5Q8IZT8 346 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 IQCF1Q8N6M8 205 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 SLC37A3Q8NCC5 494 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 PROKR2Q8NFJ6 384 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 GJC3Q8NFK1 279 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 OR9Q1Q8NGQ5 310 aa5.87□□□□□ -1.47
HMGN1-205ENST00000419378 TEX47Q8TBZ9 253 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms