RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 NHLH1Q02575 133 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 FAM189A2Q15884 450 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 GFOD2Q3B7J2 385 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 RAB12Q6IQ22 244 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 NUFIP2Q7Z417 695 aaKnown RBP14.67□□□□□ -0.06
SSBP3-205ENST00000417664 P4HA3Q7Z4N8 544 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 UBE2J2Q8N2K1 259 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 AKR7LQ8NHP1 331 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 SLC7A6Q92536 515 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 MARVELD1Q9BSK0 173 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 CLCF1Q9UBD9 225 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 SSUH2Q9Y2M2 353 aa14.67□□□□□ -0.06
SSBP3-205ENST00000417664 CIB4A0PJX0 185 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 METTL21EPA6NDL7 271 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 NAP1L6A6NFF2 107 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 E9PLN8 166 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 ORC5O43913 435 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 PRF1P14222 555 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 MPGP29372 298 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 ARR3P36575 388 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 SSBP1Q04837 148 aaKnown RBP14.66□□□□□ -0.06
SSBP3-205ENST00000417664 KLF9Q13886 244 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-205ENST00000417664 RSPO4Q2I0M5 234 aaPredicted RBP14.66□□□□□ -0.06
SSBP3-205ENST00000417664 FBXW9Q5XUX1 488 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 OR5AS1Q8N127 324 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 OR4D6Q8NGJ1 314 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 OR52I2Q8NH67 350 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 CREB3L1Q96BA8 519 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 CHST5Q9GZS9 411 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 MMP28Q9H239 520 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 NEK6Q9HC98 313 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 KLK13Q9UKR3 277 aa14.66□□□□□ -0.06
SSBP3-205ENST00000417664 OR14I1A6ND48 311 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SULT1C2O00338 296 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 LCATP04180 440 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 UBBP0CG47 229 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 OR3A2P47893 321 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 EFNB2P52799 333 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 FAPQ12884 760 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SNTB2Q13425 540 aaKnown RBP14.65□□□□□ -0.06
SSBP3-205ENST00000417664 PABPC1L2AQ5JQF8 200 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 PLXDC2Q6UX71 529 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 Q6ZS92 163 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 OR2W3Q7Z3T1 314 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SIAH3Q8IW03 269 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 FGFBP3Q8TAT2 258 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SSC4DQ8WTU2 575 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SGK3Q96BR1 496 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SOX7Q9BT81 388 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 ATG5Q9H1Y0 275 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 TAS2R8Q9NYW2 309 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 NLKQ9UBE8 527 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 GHRLQ9UBU3 117 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 MEIOCA2RUB1 952 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 XRCC2O43543 280 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 PATE4P0C8F1 98 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 TRAPPC2P0DI81 140 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 TRAPPC2BP0DI82 140 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 TMIGD3P0DMS9 266 aaPredicted RBP14.65□□□□□ -0.06
SSBP3-205ENST00000417664 GSK3AP49840 483 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 PLA2G7Q13093 441 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SNAI3Q3KNW1 292 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 PLA1AQ53H76 456 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 RPUSD3Q6P087 351 aaKnown RBP14.65□□□□□ -0.06
SSBP3-205ENST00000417664 SEMA6DQ8NFY4 1073 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 AKAP1Q92667 903 aaKnown RBP eCLIP14.65□□□□□ -0.06
SSBP3-205ENST00000417664 REEP6Q96HR9 211 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 NUDT16L1Q9BRJ7 211 aaKnown RBP14.65□□□□□ -0.06
SSBP3-205ENST00000417664 C1QTNF5Q9BXJ0 243 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 DPAGT1Q9H3H5 408 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 AUNIPQ9H7T9 357 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 ZNF224Q9NZL3 707 aa14.65□□□□□ -0.06
SSBP3-205ENST00000417664 AHRRA9YTQ3 701 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 CNOT4O95628 575 aaKnown RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 HCKP08631 526 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 ANOS1P23352 680 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 SRP9P49458 86 aaKnown RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 BTG1P62324 171 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 RIPPLY1Q0D2K3 151 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 FOXC1Q12948 553 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 SF3B4Q15427 424 aaKnown RBP eCLIP14.64□□□□□ -0.071e-6■■■■■ 27.4
SSBP3-205ENST00000417664 SFRP5Q5T4F7 317 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 RSBN1Q5VWQ0 802 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 TMEM53Q6P2H8 277 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 COLCA1Q6ZS62 124 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 CDH24Q86UP0 819 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 ANGPTL5Q86XS5 388 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 PNLDC1Q8NA58 520 aaKnown RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 NANOS1Q8WY41 292 aaKnown RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 CPNE2Q96FN4 548 aaPredicted RBP14.64□□□□□ -0.07
SSBP3-205ENST00000417664 SCPEP1Q9HB40 452 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 PIGLQ9Y2B2 252 aa14.64□□□□□ -0.07
SSBP3-205ENST00000417664 TRAV18A0A075B6X5 111 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 ANKRD20A5PA0PJZ0 165 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 C5orf63A6NC05 138 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 H7C417 338 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 GFRA3O60609 400 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 RBBP9O75884 186 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 PRSS3P35030 304 aa14.63□□□□□ -0.07
SSBP3-205ENST00000417664 ALDH3B1P43353 468 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms