RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 KLHL22Q53GT1 634 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 Q6ZR03 302 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 C8orf59Q8N0T1 100 aaPredicted RBP19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 RFLNBQ8N5W9 214 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 ACBD7Q8N6N7 88 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 YIPF7Q8N8F6 280 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 C18orf12Q96KH6 178 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 CHODLQ9H9P2 273 aa19.64■□□□□ 0.73
SMARCB1-205ENST00000417137 IGHV4-30-2A0A087WSY4 118 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 IGHV1-69-2A0A0G2JMI3 117 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 PRR32B1ATL7 298 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 NCR1O76036 304 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 TNFRSF1AP19438 455 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 ACHEP22303 614 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 CRYBB2P43320 205 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 TMEM33P57088 247 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 SNCBQ16143 134 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 GFOD2Q3B7J2 385 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 KCTD20Q7Z5Y7 419 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 APH1BQ8WW43 257 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 NRG4Q8WWG1 115 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 ITFG2Q969R8 447 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 LGALS12Q96DT0 336 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 MOB1AQ9H8S9 216 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 AMBNQ9NP70 447 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 FAM206AQ9NX38 181 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 IL19Q9UHD0 177 aa19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 MRM2Q9UI43 246 aaKnown RBP19.63■□□□□ 0.73
SMARCB1-205ENST00000417137 RNF223E7ERA6 249 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 TACSTD2P09758 323 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 COL8A2P25067 703 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 GIFP27352 417 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 PRSS12P56730 875 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 ISL1P61371 349 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 FAM3AP98173 230 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 SSX6Q7RTT6 188 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 FAM220AQ7Z4H9 259 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 OR8B12Q8NGG6 310 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 PBOV1Q9GZY1 135 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 MRPS18AQ9NVS2 196 aaKnown RBP19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 MRPL15Q9P015 296 aaKnown RBP19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 ZNF319Q9P2F9 582 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 SNX5Q9Y5X3 404 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 R4GMQ9 66 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 NF1P21359 2839 aa19.62■□□□□ 0.73
SMARCB1-205ENST00000417137 A0A0U1RQV5 110 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 IRGMA1A4Y4 181 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 LOC110117498-PIK3R3F6TDL0 507 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 LYNX1G3V0Z9 82 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 J3QRE1 110 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 MAGEB4O15481 346 aaPredicted RBP19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 WBP4O75554 376 aaKnown RBP19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 ATP6V1G2O95670 118 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 LYNX1P0DP58 116 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 ANOS1P23352 680 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 SRP9P49458 86 aaKnown RBP19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 ZNF85Q03923 595 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 HFEQ30201 348 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 FTMTQ8N4E7 242 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 CSNK2A3Q8NEV1 391 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 TFAP2CQ92754 450 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 COX4I2Q96KJ9 171 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 INPP5EQ9NRR6 644 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 NUFIP1Q9UHK0 495 aaKnown RBP19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 GTF2A1LQ9UNN4 478 aa19.61■□□□□ 0.73
SMARCB1-205ENST00000417137 ZFHX3Q15911 3703 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 A0A1B0GWJ7 208 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 ANKRD30BLA7E2S9 258 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 SMAD7O15105 426 aaKnown RBP19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 GMDSO60547 372 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 CDC14BO60729 498 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 INHBBP09529 407 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 NR4A2P43354 598 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 GSK3AP49840 483 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 ZNF684Q5T5D7 378 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 LIPNQ5VXI9 398 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 KLBQ86Z14 1044 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 EGFL6Q8IUX8 553 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 OR56B2PQ8NGI1 322 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 CNIH3Q8TBE1 160 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 SIGLEC11Q96RL6 698 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 GNG8Q9UK08 70 aa19.6■□□□□ 0.73
SMARCB1-205ENST00000417137 MTORP42345 2549 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 hCG_38984A0A1B0GV85 526 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 VWC2LB2RUY7 222 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 LILRA1O75019 489 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 RPP14O95059 124 aaKnown RBP19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 CA6P23280 308 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 ACTA2P62736 377 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 ACTG2P63267 376 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 SLC3A1Q07837 685 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 MZT1Q08AG7 82 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 RIN1Q13671 783 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 OR8G1Q15617 311 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 BCL2L15Q5TBC7 163 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 THAP5Q7Z6K1 395 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 COMMD2Q86X83 199 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 CIARTQ8N365 385 aaPredicted RBP19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 SPERTQ8NA61 448 aa19.59■□□□□ 0.73
SMARCB1-205ENST00000417137 YIPF5Q969M3 257 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms