RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NECAP2Q9NVZ3 263 aa11.65□□□□□ -0.54
SCN1B-202ENST00000415950 NDUFB6O95139 128 aa11.65□□□□□ -0.55
SCN1B-202ENST00000415950 NFYBP25208 207 aa11.65□□□□□ -0.55
SCN1B-202ENST00000415950 CARD18P57730 90 aa11.65□□□□□ -0.55
SCN1B-202ENST00000415950 SNRPEP62304 92 aaKnown RBP11.65□□□□□ -0.55
SCN1B-202ENST00000415950 ETFBKMTQ8IXQ9 262 aa11.65□□□□□ -0.55
SCN1B-202ENST00000415950 SPPL3Q8TCT6 385 aa11.65□□□□□ -0.55
SCN1B-202ENST00000415950 TMEM184BQ9Y519 407 aaPredicted RBP11.65□□□□□ -0.55
SCN1B-202ENST00000415950 AQP7O14520 342 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 ADAM10O14672 748 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 JTBO76095 146 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 CPN1P15169 458 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 SRPXP78539 464 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 PCK2Q16822 640 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 AGBL4Q5VU57 503 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 DPPA2Q7Z7J5 298 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 C1orf87Q8N0U7 546 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 LANCL2Q9NS86 450 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 B9D1Q9UPM9 204 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 CDKN2AP42771 156 aaKnown RBP11.64□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF85Q03923 595 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 DPTQ07507 201 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 TMEM52BQ4KMG9 183 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 PHYHD1Q5SRE7 291 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 OR2W3Q7Z3T1 314 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 LHX4Q969G2 390 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 KTI12Q96EK9 354 aaPredicted RBP11.64□□□□□ -0.55
SCN1B-202ENST00000415950 ARHGDIGQ99819 225 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 LSM2Q9Y333 95 aaKnown RBP11.64□□□□□ -0.55
SCN1B-202ENST00000415950 SLCO1B1Q9Y6L6 691 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 SNRPGP15A8MWD9 76 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 SCGB2A1O75556 95 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 SDHAP31040 664 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 CXCL12P48061 93 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 PRSS12P56730 875 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 PLA1AQ53H76 456 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 TMEM268Q5VZI3 342 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 CBLN3Q6UW01 205 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 GRINAQ7Z429 371 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 UBE3DQ7Z6J8 389 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 BCORP1Q8N888 145 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 FBLIM1Q8WUP2 373 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 AKR1E2Q96JD6 320 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 CRLF2Q9HC73 371 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 GPR160Q9UJ42 338 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 MMP24Q9Y5R2 645 aa11.64□□□□□ -0.55
SCN1B-202ENST00000415950 TP53BP1Q12888 1972 aaPredicted RBP11.64□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF732B4DXR9 585 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 TIMM8AO60220 97 aaPredicted RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 DHRS2Q13268 280 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 NUBPLQ8TB37 319 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 CABLES2Q9BTV7 478 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 C12orf49Q9H741 205 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 A0A0B4J293 547 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 C17orf112F2Z3M2 114 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF749O43361 778 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SSSCA1O60232 199 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SOX15O60248 233 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 LRP3O75074 770 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 QDPRP09417 244 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 CT62P0C5K7 136 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 DAOP14920 347 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 HSF1Q00613 529 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 PMP22Q01453 160 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 MLF2Q15773 248 aaPredicted RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SP6Q3SY56 376 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 FCRL6Q6DN72 434 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 ZNF770Q6IQ21 691 aaPredicted RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 LANCL3Q6ZV70 420 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SCMH1Q96GD3 660 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SLC22A11Q9NSA0 550 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 THAP10Q9P2Z0 257 aaPredicted RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 TRAV1-2A0A0B4J238 106 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 A0A1W2PPQ1 181 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SEMG1P04279 462 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 MGMTP16455 207 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 ZP3P21754 424 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 YPEL5P62699 121 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 RPUSD3Q6P087 351 aaKnown RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 THNSL2Q86YJ6 484 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 OR6K3Q8NGY3 331 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 OR51F2Q8NH61 342 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 BCO1Q9HAY6 547 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 CHRNA9Q9UGM1 479 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 FOXJ3Q9UPW0 622 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 RNF212BA8MTL3 300 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 CST7O76096 145 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 VEGFBP49765 207 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 OR1D5P58170 312 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SLC10A1Q14973 349 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 ETFDHQ16134 617 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 C1QL3Q5VWW1 255 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 C8orf44Q96CB5 159 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 INTS12Q96CB8 462 aaKnown RBP11.63□□□□□ -0.55
SCN1B-202ENST00000415950 SCPEP1Q9HB40 452 aa11.63□□□□□ -0.55
SCN1B-202ENST00000415950 TAF1LQ8IZX4 1826 aa11.62□□□□□ -0.55
SCN1B-202ENST00000415950 DFFBO76075 338 aa11.62□□□□□ -0.55
SCN1B-202ENST00000415950 AQP8O94778 261 aa11.62□□□□□ -0.55
SCN1B-202ENST00000415950 OR5H8P0DN80 308 aa11.62□□□□□ -0.55
SCN1B-202ENST00000415950 IAPPP10997 89 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms