RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 ZNF485Q8NCK3 441 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 C4orf36Q96KX1 117 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 SORCS2Q96PQ0 1159 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 MND1Q9BWT6 205 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 ELOVL3Q9HB03 270 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 ATP23Q9Y6H3 246 aa14.25□□□□□ -0.13
CDC42EP1-202ENST00000415670 J3QLW9 94 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 RGS9O75916 674 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 TACSTD2P09758 323 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 SMIM18P0DKX4 95 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 ZNF19P17023 458 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 STOMP27105 288 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 DCTDP32321 178 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 MAP2K4P45985 399 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 IDH3GP51553 393 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 WNT4P56705 351 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 OR12D2P58182 307 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 EMX1Q04741 257 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 RSPO1Q2MKA7 263 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 LIPNQ5VXI9 398 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 FAM220AQ7Z4H9 259 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 YIPF7Q8N8F6 280 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 SPRYD4Q8WW59 207 aaPredicted RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 MS4A3Q96HJ5 214 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 KCNJ15Q99712 375 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 NIPAL2Q9H841 368 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 ISG20L2Q9H9L3 353 aaKnown RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 ACOT13Q9NPJ3 140 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 GNG8Q9UK08 70 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 LSM2Q9Y333 95 aaKnown RBP14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 MGAM2Q2M2H8 2515 aa14.24□□□□□ -0.13
CDC42EP1-202ENST00000415670 LOC100509620A0A075B734 347 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 IGHV1-18A0A0C4DH31 117 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 MT-ND5P03915 603 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 CELA3BP08861 270 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 DBHP09172 617 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 PCMT1P22061 227 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 HSD11B1P28845 292 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 APLNRP35414 380 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 MYPOPQ86VE0 399 aaPredicted RBP14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 SLC30A7Q8NEW0 376 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 SLC7A6Q92536 515 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 SPTSSAQ969W0 71 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 PELI1Q96FA3 418 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 POM121L2Q96KW2 1035 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 ACOXLQ9NUZ1 547 aa14.23□□□□□ -0.13
CDC42EP1-202ENST00000415670 TCF21O43680 179 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 SRSF10O75494 262 aaKnown RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 APOC1P02654 83 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 ACSM4P0C7M7 580 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 CECR9P0C854 216 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 GDI2P50395 445 aaKnown RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 PSMA6P60900 246 aaKnown RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 GALK2Q01415 458 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 MRPL28Q13084 256 aaKnown RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 SPHARQ15513 63 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 TBC1D28Q2M2D7 210 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 DRAM2Q6UX65 266 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 OR1J2Q8NGS2 313 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 HAVCR2Q8TDQ0 301 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 GATAD2BQ8WXI9 593 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 FCGR1BQ92637 280 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 OR5M11Q96RB7 305 aa14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 DCLRE1CQ96SD1 692 aaKnown RBP14.22□□□□□ -0.13
CDC42EP1-202ENST00000415670 C5orf49A4QMS7 147 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 F5H5K5 113 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 M0R135 149 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ATP6V1B1P15313 513 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 CX3CR1P49238 355 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 PDLIM4P50479 330 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 MMP16P51512 607 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 PRKXP51817 358 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 GBX2P52951 348 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 TPTEP56180 551 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 DOC2BQ14184 412 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 SWI5Q1ZZU3 235 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ZNF829Q3KNS6 432 aaPredicted RBP14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 FDX2Q6P4F2 183 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 TMEM108Q6UXF1 575 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 KCTD8Q6ZWB6 473 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ZNF367Q7RTV3 350 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ZNF283Q8N7M2 679 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 IL17RDQ8NFM7 739 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 RORBQ92753 470 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ZNF799Q96GE5 643 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 RADILQ96JH8 1075 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 MRPS26Q9BYN8 205 aaKnown RBP14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 BABAM2Q9NXR7 383 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 R4GMQ9 66 aa14.21□□□□□ -0.13
CDC42EP1-202ENST00000415670 ATP6V1G2-DDX39BF2Z307 99 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 RPP14O95059 124 aaKnown RBP14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 LCKP06239 509 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 CCL2P13500 99 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 ZNF35P13682 527 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 PTAFRP25105 342 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 TGM4P49221 684 aa14.2□□□□□ -0.14
CDC42EP1-202ENST00000415670 HGFACQ04756 655 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms