RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 OAZ3Q9UMX2 235 aa12.47□□□□□ -0.41
LIMS4-201ENST00000413601 PCDHB10Q9UN67 800 aa12.47□□□□□ -0.41
LIMS4-201ENST00000413601 WNK2Q9Y3S1 2297 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 IFNL4K9M1U5 179 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 ZNF205O95201 554 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 MRPL3P09001 348 aaKnown RBP12.46□□□□□ -0.41
LIMS4-201ENST00000413601 ALOX5APP20292 161 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 PCMT1P22061 227 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 PMELP40967 661 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 RAD23AP54725 363 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 ACTR3P61158 418 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 C12orf73Q69YU5 71 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 FAHD2BQ6P2I3 314 aaPredicted RBP12.46□□□□□ -0.41
LIMS4-201ENST00000413601 LRRN1Q6UXK5 716 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 SLC16A9Q7RTY1 509 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 KLHL36Q8N4N3 616 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 SPSB4Q96A44 273 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 FAHD2AQ96GK7 314 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 REEP6Q96HR9 211 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 ADAT1Q9BUB4 502 aaKnown RBP12.46□□□□□ -0.41
LIMS4-201ENST00000413601 PRRG3Q9BZD7 231 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 OPA3Q9H6K4 179 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 SP140LQ9H930 580 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 MRPL15Q9P015 296 aaKnown RBP12.46□□□□□ -0.41
LIMS4-201ENST00000413601 LAMP5Q9UJQ1 280 aa12.46□□□□□ -0.41
LIMS4-201ENST00000413601 EBAG9O00559 213 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 GMDSO60547 372 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 POLR2IP36954 125 aaKnown RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 SRP14P37108 136 aaKnown RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 MDH2P40926 338 aaKnown RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 CD200P41217 278 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 GATA4P43694 442 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 LCN2P80188 198 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 EFNB1P98172 346 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 FAM3AP98173 230 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 MPPED2Q15777 294 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 GFOD2Q3B7J2 385 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 TMEM155Q4W5P6 130 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 FAM201AQ5SY85 155 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 LCN1P1Q5VSP4 162 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 PRAMEF6Q5VXH4 476 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 KRT77Q7Z794 578 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 SPICQ8N5J4 248 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 CELF2-AS1Q8N7Q2 184 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 OR52H1Q8NGJ2 320 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 TMEM163Q8TC26 289 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 PGAM5Q96HS1 289 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 IL4I1Q96RQ9 567 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 PKP2Q99959 881 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 OSBPL10Q9BXB5 764 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 YIPF3Q9GZM5 350 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 SLC22A4Q9H015 551 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 OR10A2Q9H208 303 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 PATZ1Q9HBE1 687 aaKnown RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 G6PC2Q9NQR9 355 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 UFSP2Q9NUQ7 469 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 H2AFY2Q9P0M6 372 aaPredicted RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 ENOPH1Q9UHY7 261 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 NOP16Q9Y3C1 178 aaKnown RBP12.45□□□□□ -0.42
LIMS4-201ENST00000413601 LRP12Q9Y561 859 aa12.45□□□□□ -0.42
LIMS4-201ENST00000413601 LRRC30A6NM36 301 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 H3BNX3 289 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 PSMD9O00233 223 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 PNPP00491 289 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 ZNF181Q2M3W8 571 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 MEPCEQ7L2J0 689 aaKnown RBP12.44□□□□□ -0.42
LIMS4-201ENST00000413601 TTTY10Q9BZA0 68 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 RIBC2Q9H4K1 309 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
LIMS4-201ENST00000413601 SVEP1Q4LDE5 3571 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 hCG_38984A0A1B0GV85 526 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 ANKRD30BLA7E2S9 258 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 FAM20BO75063 409 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 AVPP01185 164 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 IRF2P14316 349 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 ZFP36P26651 326 aaKnown RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 DDOSTP39656 456 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 GSK3AP49840 483 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 SEC61A1P61619 476 aaKnown RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 AADACL4Q5VUY2 407 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 DCAF12L2Q5VW00 463 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 NXNL2Q5VZ03 156 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 KCTD18Q6PI47 426 aaPredicted RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 C1orf87Q8N0U7 546 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 MUC20Q8N307 709 aaPredicted RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 OR11L1Q8NGX0 322 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 Q8TCH9 128 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 ERGIC1Q969X5 290 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 RBM4BQ9BQ04 359 aaKnown RBP12.43□□□□□ -0.42
LIMS4-201ENST00000413601 GABARAPL3Q9BY60 117 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 PPP1R3EQ9H7J1 279 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
LIMS4-201ENST00000413601 PPIAL4EA0A075B759 164 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 A0A0G2JMP0 313 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 A0A0X1KG70 313 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 SLC22A31A6NKX4 558 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 PRR32B1ATL7 298 aa12.42□□□□□ -0.42
LIMS4-201ENST00000413601 F5H0A9 414 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms