RNA–Protein interactions for RNA: ENST00000412649.5

CLTCL1-201, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 4,635 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-201ENST00000412649 TMEM217Q8N7C4 229 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 OR8U1Q8NH10 309 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 RSC1A1Q92681 617 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 PRSS38A1L453 326 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 PHF1O43189 567 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 UTS2O95399 124 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 HPNP05981 417 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF41P51814 821 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 C21orf62-AS1Q17RA5 79 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 PHLDA2Q53GA4 152 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM151BQ8IW70 566 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ZPLD1Q8TCW7 415 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 IER2Q9BTL4 223 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 KLRF1Q9NZS2 232 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 WASF3Q9UPY6 502 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ST8SIA5O15466 376 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 MT-ATP6P00846 226 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 TIMP1P01033 207 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 JMJD7P0C870 316 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ARF1P84077 181 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 CPEB2Q7Z5Q1 589 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF709Q8N972 641 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 SUMF1Q8NBK3 374 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 NAA11Q9BSU3 229 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 HDAC8Q9BY41 377 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 ZCCHC4Q9H5U6 513 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 MMP25Q9NPA2 562 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 CES1P1Q9UKY3 287 aa12.49□□□□□ -0.41
CLTCL1-201ENST00000412649 VSTM2BA6NLU5 285 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 GPR137BO60478 399 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 GLI4P10075 376 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 RAB4AP20338 218 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 DDTP30046 118 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 BTG2P78543 158 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 ISXQ2M1V0 245 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM123Q8N131 208 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 BCORP1Q8N888 145 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 FAM210BQ96KR6 192 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 RNF224P0DH78 156 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 GLRA1P23415 457 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 RNF4P78317 190 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 FAM219AQ8IW50 185 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 ADAMTS17Q8TE56 1095 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 POM121Q96HA1 1249 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 TGM7Q96PF1 710 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 KLHDC2Q9Y2U9 406 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 LOC285556D6RIA3 1793 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 A0A1B0GTQ1 180 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 OR5H15A6NDH6 313 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 OR5H1A6NKK0 313 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 CDX1P47902 265 aaPredicted RBP12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 TGIF1Q15583 401 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 FAM57BQ71RH2 274 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 RPS4Y2Q8TD47 263 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 S1PR5Q9H228 398 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 PDE7BQ9NP56 450 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 OR5AC2Q9NZP5 309 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 GNG13Q9P2W3 67 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 WSB1Q9Y6I7 421 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 GREB1Q4ZG55 1949 aa12.48□□□□□ -0.41
CLTCL1-201ENST00000412649 EPHA1P21709 976 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 SRSF3P84103 164 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 LY6G6FQ5SQ64 297 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 KCNIP4Q6PIL6 250 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 UEVLDQ8IX04 471 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 OR51F2Q8NH61 342 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 DAZLQ92904 295 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 NXPE3Q969Y0 559 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 TMEM18Q96B42 140 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 GNPNAT1Q96EK6 184 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF160Q9HCG1 818 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 A0A1W2PPV9 198 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 PTBP3O95758 552 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 MST1P26927 711 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 PNLIPRP3Q17RR3 467 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 OR51A2Q8NGJ7 313 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 TMED7-TICAM2A0A0A6YYA0 188 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 F5H5K5 113 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 IL9P15248 144 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 POLR2HP52434 150 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 PLXDC2Q6UX71 529 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 FAM185AQ8N0U4 392 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 ARHGEF39Q8N4T4 335 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 ZSCAN4Q8NAM6 433 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 OR5L1Q8NGL2 311 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 KLHL13Q9P2N7 655 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 YBX2Q9Y2T7 364 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 PIGBOS1A0A0B4J2F0 54 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 NDUFS6O75380 124 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 FCGR2AP12318 317 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 ZNF16P17020 682 aaPredicted RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 OR1D4P47884 311 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 SRPXP78539 464 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 NT5CQ8TCD5 201 aa12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 RBMXL1Q96E39 390 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-201ENST00000412649 CNTD2Q9H8S5 307 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms