RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 NR2C2APQ86WQ0 139 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SAXO1Q8IYX7 474 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 OR10X1Q8NGY0 326 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 LYPD6BQ8NI32 183 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 MOAP1Q96BY2 351 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ZNF607Q96SK3 696 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 TBX5Q99593 518 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 MRPL22Q9NWU5 206 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 TFCP2L1Q9NZI6 479 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ZNF581Q9P0T4 197 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SLC2A6Q9UGQ3 507 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SLC13A4Q9UKG4 626 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 HCFC2Q9Y5Z7 792 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GAGE12BA1L429 117 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 A6NIN4 97 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 OR1I1O60431 355 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 VSIG10L2P0DP72 767 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 PRDX3P30048 256 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 IGFALSP35858 605 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 DUSP3P51452 185 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 TPI1P60174 286 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ARF3P61204 181 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 ARF1P84077 181 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 PTSQ03393 145 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SMAGPQ0VAQ4 97 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SFRP4Q6FHJ7 346 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 MBOAT2Q6ZWT7 520 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SERPINA9Q86WD7 417 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 NIT1Q86X76 327 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 CLEC10AQ8IUN9 316 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 C17orf78Q8N4C9 275 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ZBTB34Q8NCN2 500 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 C1orf162Q8NEQ5 155 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 OR5D16Q8NGK9 328 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 NEIL3Q8TAT5 605 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 RNF133Q8WVZ7 376 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 HAVCR1Q96D42 359 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 DUSP16Q9BY84 665 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ONECUT1Q9UBC0 465 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 FBXW11Q9UKB1 542 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 RAI2Q9Y5P3 530 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 TSSC4Q9Y5U2 329 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 ANKRD12Q6UB98 2062 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 A0A1B0GTI1 187 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 NKX2-6A6NCS4 301 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ZNF891A8MT65 544 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 E7EQ34 232 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 IFNL4K9M1U5 179 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GOSR2O14653 212 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GCM2O75603 506 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 REM1O75628 298 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 CSTBP04080 98 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 CHI3L1P36222 383 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 DLSTP36957 453 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 EFNA5P52803 228 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 SUMO3P55854 103 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 PDLIM3Q53GG5 364 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 C5orf47Q569G3 176 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 CRB2Q5IJ48 1285 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 RPL22L1Q6P5R6 122 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 SMIM20Q8N5G0 67 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 NOXO1Q8NFA2 376 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 AUNIPQ9H7T9 357 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 FKBP11Q9NYL4 201 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GALPQ9UBC7 116 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 WDR45Q9Y484 360 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 UNC119BA6NIH7 251 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 PPP5D1E7EU14 171 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 J3QRE1 110 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 DCTN6O00399 190 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 MSCO60682 206 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 DCNP07585 359 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 TMEM225BP0DP42 221 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ESDP10768 282 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 LTBRP36941 435 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GPR6P46095 362 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 SLC6A9P48067 706 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 UCP2P55851 309 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 IFI44LQ53G44 452 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 VWA2Q5GFL6 755 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 CTSL3PQ5NE16 218 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 PAQR6Q6TCH4 344 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 GPSM1Q86YR5 675 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 APOBEC4Q8WW27 367 aaKnown RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 MRIQ9BWK5 157 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ATG5Q9H1Y0 275 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 CDH20Q9HBT6 801 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 OR2S2Q9NQN1 319 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 ZNF107Q9UII5 783 aaPredicted RBP4.67□□□□□ -1.66
HERC4-205ENST00000412272 LAMTOR2Q9Y2Q5 125 aa4.67□□□□□ -1.66
HERC4-205ENST00000412272 TICRRQ7Z2Z1 1910 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 TRAV1-2A0A0B4J238 106 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 C1orf226A1L170 272 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 F8WDY8 70 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CD1AP06126 327 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 ZNF19P17023 458 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 MSR1P21757 451 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 CDKN1AP38936 164 aa4.66□□□□□ -1.66
HERC4-205ENST00000412272 LPAR6P43657 344 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms