RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 TMEM251Q8N6I4 163 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CHST4Q8NCG5 386 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 OR10W1Q8NGF6 305 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 OR10Z1Q8NGY1 313 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 DYNC2LI1Q8TCX1 351 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ZFP90Q8TF47 636 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 LRRC29Q8WV35 223 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RNF133Q8WVZ7 376 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 IL22RA2Q969J5 263 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 FAM3DQ96BQ1 224 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CMTM5Q96DZ9 223 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RASL11BQ9BPW5 248 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 PDCD1LG2Q9BQ51 273 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 NICN1Q9BSH3 213 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 NXF2Q9GZY0 626 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ASB8Q9H765 288 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 AIG1Q9NVV5 245 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 CD274Q9NZQ7 290 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ATPIF1Q9UII2 106 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 RAB23Q9ULC3 237 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 TFR2Q9UP52 801 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 AP3M1Q9Y2T2 418 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 MRPS18BQ9Y676 258 aaKnown RBP3.43□□□□□ -1.86
BRCA1-204ENST00000412061 KCNE3Q9Y6H6 103 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 STYXL1Q9Y6J8 313 aa3.43□□□□□ -1.86
BRCA1-204ENST00000412061 ADAMTSL3P82987 1691 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 IGHV3OR16-10A0A075B7F0 116 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 IGHV2OR16-5A0A0B4J2B6 119 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 A0A0J9YWU9 116 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 KIR2DS1A0A191URI9 304 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 FAM240AA0A1B0GVK7 77 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 SHISA9B4DS77 424 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 M0R1B8 84 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF780AO75290 641 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-204ENST00000412061 LYPLA1O75608 230 aaPredicted RBP3.42□□□□□ -1.86
BRCA1-204ENST00000412061 RPP14O95059 124 aaKnown RBP3.42□□□□□ -1.86
BRCA1-204ENST00000412061 TTC4O95801 387 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 CD8AP01732 235 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 IGHV3-48P01763 117 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 LIMS3P0CW19 117 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 LIMS4P0CW20 117 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PFN2P35080 140 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PPICP45877 212 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 CEBPGP53567 150 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 TAS2R31P59538 309 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PPP1CBP62140 327 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 SLC35A1P78382 337 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 CD164Q04900 197 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 C2orf54Q08AI8 447 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 KIR2DS1Q14954 304 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 GPNMBQ14956 572 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PIGGQ5H8A4 983 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 TFDP3Q5H9I0 405 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PAGE3Q5JUK9 113 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 METTL7BQ6UX53 244 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 NPWQ8N729 165 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 OR1N2Q8NGR9 330 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 OR10J6PQ8NGY7 276 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 FCRL1Q96LA6 429 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF599Q96NL3 588 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 C9orf16Q9BUW7 83 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 GABARAPL3Q9BY60 117 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 ARV1Q9H2C2 271 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 Q9H3A6 140 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 METTL8Q9H825 291 aaKnown RBP3.42□□□□□ -1.86
BRCA1-204ENST00000412061 ZDHHC4Q9NPG8 344 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 PRELID1Q9Y255 219 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 FLVCR1Q9Y5Y0 555 aa3.42□□□□□ -1.86
BRCA1-204ENST00000412061 CEMIPQ8WUJ3 1361 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 EPM2AB3EWF7 344 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 H0Y980 276 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 GOLGA6L19H0YKK7 550 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 H7C417 338 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 CRXO43186 299 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PHF1O43189 567 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 CTNSO60931 367 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 LYPLA2O95372 231 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 SEMG1P04279 462 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 PVALBP20472 110 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 MYL9P24844 172 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 MYCNOSP40205 109 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 TGM4P49221 684 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 SLC25A1P53007 311 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 VSX2P58304 361 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 TAS2R19P59542 299 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 CXCL6P80162 114 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 REG3AQ06141 175 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 KIAA0087Q14695 138 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 CLVS2Q5SYC1 327 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 DRAM2Q6UX65 266 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 GSG1LQ6UXU4 331 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 LINC00173Q6ZV60 143 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 METTL13Q8N6R0 699 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 NKAPP1Q8N9T2 125 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 CCDC112Q8NEF3 446 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 TTLQ8NG68 377 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 OR2AE1Q8NHA4 323 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF689Q96CS4 500 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-204ENST00000412061 YIPF6Q96EC8 236 aa3.41□□□□□ -1.86
BRCA1-204ENST00000412061 ZNF184Q99676 751 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms