RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 KRTAP27-1Q3LI81 207 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 OR2B11Q5JQS5 317 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 C1orf100Q5SVJ3 147 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 C1orf146Q5VVC0 180 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 FRMPD2BQ6IN97 320 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 PAMR1Q6UXH9 720 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 C12orf54Q6X4T0 127 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 ZADH2Q8N4Q0 377 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 OR5AR1Q8NGP9 310 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 ZNF461Q8TAF7 563 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 SDR42E1Q8WUS8 393 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 RORBQ92753 470 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 RCN3Q96D15 328 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 SIGLEC12Q96PQ1 595 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 P2RX4Q99571 388 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 TSNAXQ99598 290 aaKnown RBP3.8□□□□□ -1.8
LSM5-206ENST00000409987 C6orf50Q9HD87 102 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 C1orf109Q9NX04 203 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 SLC25A37Q9NYZ2 338 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 XCL2Q9UBD3 114 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 KLHL21Q9UJP4 597 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 VSIG4Q9Y279 399 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 UGT2A1Q9Y4X1 527 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 ADGBQ8N7X0 1667 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 CHD4Q14839 1912 aa3.8□□□□□ -1.8
LSM5-206ENST00000409987 MYOM2P54296 1465 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 MBD5Q9P267 1494 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 ARHGAP31Q2M1Z3 1444 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 PLEKHG1Q9ULL1 1385 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 MAPK8IP3Q9UPT6 1336 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 IGKV1D-13A0A0B4J2D9 117 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 ANKRD65E5RJM6 399 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 GABRPO00591 440 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 TBL1XO60907 577 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 SRP72O76094 671 aaKnown RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 HPNP05981 417 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 KRT7P08729 469 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 IGKV1-13P0DP09 117 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 HLA-GP17693 338 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 LOXP28300 417 aaPredicted RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 ZNF121P58317 390 aaPredicted RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 OR2B8PP59922 312 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 PRPS1P60891 318 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 DSTNP60981 165 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 NUTF2P61970 127 aaKnown RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 TGFBR3Q03167 851 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 MXD1Q05195 221 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 GPNMBQ14956 572 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 BCL2A1Q16548 175 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 RBM48Q5RL73 367 aaKnown RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 SLC25A30Q5SVS4 291 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 MARC1Q5VT66 337 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 NPSR1Q6W5P4 371 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 ZNF620Q6ZNG0 422 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 COX15Q7KZN9 410 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 KRT222Q8N1A0 295 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 PNKDQ8N490 385 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 ARRDC1Q8N5I2 433 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 OR9G1Q8NH87 305 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 OR51E1Q8TCB6 317 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 PHF10Q8WUB8 498 aaKnown RBP3.79□□□□□ -1.8
LSM5-206ENST00000409987 IFT81Q8WYA0 676 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 TMEM230Q96A57 120 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 VSIG2Q96IQ7 327 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 DCUN1D5Q9BTE7 237 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 REEP1Q9H902 201 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 TMBIM4Q9HC24 238 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 ISYNA1Q9NPH2 558 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 TMEM9BQ9NQ34 198 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 TREX1Q9NSU2 369 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 SLC39A1Q9NY26 324 aa3.79□□□□□ -1.8
LSM5-206ENST00000409987 FMN1Q68DA7 1419 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 TNRC18O15417 2968 aaPredicted RBP3.78□□□□□ -1.8
LSM5-206ENST00000409987 MTUS2Q5JR59 1369 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 TRAV39A0A0B4J263 110 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 SULT1C2O00338 296 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 ZW10O43264 779 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 SLC16A7O60669 478 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 ADAP1O75689 374 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 PET100P0DJ07 73 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 GABRG2P18507 467 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 USF1P22415 310 aaPredicted RBP3.78□□□□□ -1.8
LSM5-206ENST00000409987 GNRHRP30968 328 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 ARL2P36404 184 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 MAGEA2P43356 314 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 MAGEA3P43357 314 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 HCAR3P49019 387 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 AP1S2P56377 157 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 PON2Q15165 354 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 PRR4Q16378 134 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 GSG1Q2KHT4 349 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 BAIAP2L2Q6UXY1 529 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 PAGE2Q7Z2X7 111 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 P2RY8Q86VZ1 359 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 FUNDC1Q8IVP5 155 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 CA13Q8N1Q1 262 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 OR4F15Q8NGB8 312 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 OR52E2Q8NGJ4 325 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 CHMP6Q96FZ7 201 aa3.78□□□□□ -1.8
LSM5-206ENST00000409987 TSG101Q99816 390 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms