RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GK3PQ14409 553 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 MPPED2Q15777 294 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 OR2T5Q6IEZ7 315 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 LCN8Q6JVE9 175 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 DHFR2Q86XF0 187 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 OR6K6Q8NGW6 343 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 OR2T29Q8NH02 315 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 TECTBQ96PL2 329 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 DUX5Q96PT3 197 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 DGCR6LQ9BY27 220 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 TOR3AQ9H497 397 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 CENPMQ9NSP4 180 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 C14orf119Q9NWQ9 140 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 ERVK-18Q9QC07 812 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 DOCK11Q5JSL3 2073 aa12.29□□□□□ -0.44
CBX3-203ENST00000409747 TRAV38-1A0A0B4J264 116 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 TCRBV5S2A0A599 114 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 LGALS8O00214 317 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 ZNF593O00488 134 aaPredicted RBP12.28□□□□□ -0.44
CBX3-203ENST00000409747 APOC1P02654 83 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 LIPFP07098 398 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 EGR1P18146 543 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 PRKXP51817 358 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 IL13RA1P78552 427 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 OR8B8Q15620 311 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 MICAQ29983 383 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 GPR157Q5UAW9 335 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 LYPD4Q6UWN0 246 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 LYPD2Q6UXB3 125 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 ZNRF4Q8WWF5 429 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 C1orf147Q96MC9 270 aaPredicted RBP12.28□□□□□ -0.44
CBX3-203ENST00000409747 NMNAT2Q9BZQ4 307 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 IGHV3OR16-10A0A075B7F0 116 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 OOEPA6NGQ2 149 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 ANKRD30BLA7E2S9 258 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 B2RBV5 119 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 SOX14O95416 240 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 GYPBP06028 91 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 HSD11B1P28845 292 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 TRIM25Q14258 630 aaKnown RBP12.28□□□□□ -0.44
CBX3-203ENST00000409747 SLC9A3R2Q15599 337 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 ZNF841Q6ZN19 808 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 OR56B2PQ8NGI1 322 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 OR4Q3Q8NH05 313 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 TEX47Q8TBZ9 253 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 SPSB4Q96A44 273 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 NSL1Q96IY1 281 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 ARMC1Q9NVT9 282 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 C1orf123Q9NWV4 160 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 PCDHGB1Q9Y5G3 927 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 U3KQV3 271 aa12.28□□□□□ -0.44
CBX3-203ENST00000409747 DHRS12A0PJE2 317 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 A6NLC8 198 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 SLC2A1P11166 492 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 PSKH1P11801 424 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 CFL1P23528 166 aaKnown RBP12.27□□□□□ -0.45
CBX3-203ENST00000409747 GRK5P34947 590 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 CX3CR1P49238 355 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 GYS2P54840 703 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 FGF12P61328 243 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 TIGD6Q17RP2 521 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 C11orf91Q3C1V1 193 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 BOLLQ8N9W6 283 aaKnown RBP12.27□□□□□ -0.45
CBX3-203ENST00000409747 PNLDC1Q8NA58 520 aaKnown RBP12.27□□□□□ -0.45
CBX3-203ENST00000409747 ZNF511Q8NB15 262 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 C19orf18Q8NEA5 215 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 OR8S1Q8NH09 359 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 LRGUKQ96M69 825 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 CMC2Q9NRP2 79 aa12.27□□□□□ -0.45
CBX3-203ENST00000409747 hCG_1807616A0A1W2PRN6 198 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 C22orf46C9J442 243 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 C3orf80F5H4A9 247 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 TBX1O43435 398 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 ADAM20O43506 726 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 ANXA2P07355 339 aaKnown RBP12.26□□□□□ -0.45
CBX3-203ENST00000409747 GRPP07492 148 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 CALB2P22676 271 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 PPP1R8Q12972 351 aaKnown RBP12.26□□□□□ -0.45
CBX3-203ENST00000409747 EIF2B1Q14232 305 aaKnown RBP12.26□□□□□ -0.45
CBX3-203ENST00000409747 SNCBQ16143 134 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 SFRP4Q6FHJ7 346 aaPredicted RBP12.26□□□□□ -0.45
CBX3-203ENST00000409747 CD300LDQ6UXZ3 194 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 RHOUQ7L0Q8 258 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 FTMTQ8N4E7 242 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 OR10G2Q8NGC3 310 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 OR52H1Q8NGJ2 320 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 ZDHHC16Q969W1 377 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 INTS14Q96SY0 518 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 PRPF19Q9UMS4 504 aaKnown RBP12.26□□□□□ -0.45
CBX3-203ENST00000409747 N6AMT1Q9Y5N5 214 aa12.26□□□□□ -0.45
CBX3-203ENST00000409747 ARRDC5A6NEK1 342 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 POM121CA8CG34 1229 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 P2RY10O00398 339 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 TIPRLO75663 272 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 RAP2AP10114 183 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 CLUP10909 449 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 PAICSP22234 425 aaKnown RBP12.25□□□□□ -0.45
CBX3-203ENST00000409747 PRR31Q5SQ13 230 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 SHFQ7M4L6 423 aa12.25□□□□□ -0.45
CBX3-203ENST00000409747 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms