RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EMC9Q9Y3B6 208 aa11.39□□□□□ -0.59
SMARCB1-203ENST00000407082 NIPBLQ6KC79 2804 aaeCLIP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ANKHD1Q8IWZ3 2542 aaKnown RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 DCHS2Q6V1P9 2916 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 LOC107986453A0A1B0GWG9 222 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 UBE2QL1A1L167 161 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 AQP7P3A6NL99 342 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 P04436 131 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 CCL3P10147 92 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 GABRA1P14867 456 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 CPN1P15169 458 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 RPS27P42677 84 aaKnown RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 MECP2P51608 486 aaKnown RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 CLDN12P56749 244 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 GRB2P62993 217 aaKnown RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 RBMS2Q15434 407 aaKnown RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 FCN2Q15485 313 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ODF4Q2M2E3 257 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 FAM166AQ6J272 317 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 TMPPEQ6ZT21 453 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ELMOD2Q8IZ81 293 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM178AQ8NBL3 297 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 OR51D1Q8NGF3 324 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 OR5D14Q8NGL3 314 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 OR1J4Q8NGS1 313 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 PAQR8Q8TEZ7 354 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 GIMAP1Q8WWP7 306 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 C11orf40Q8WZ69 217 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ORAI1Q96D31 301 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 DNAJA3Q96EY1 480 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 UQCC2Q9BRT2 126 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 BEX2Q9BXY8 128 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 HES7Q9BYE0 225 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ATG5Q9H1Y0 275 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 AUNIPQ9H7T9 357 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 NOX3Q9HBY0 568 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 SH2D2AQ9NP31 389 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 G6PC2Q9NQR9 355 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 CYB5R1Q9UHQ9 305 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 RAB22AQ9UL26 194 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 CHCHD2Q9Y6H1 151 aaPredicted RBP11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 ABCA2Q9BZC7 2435 aa11.38□□□□□ -0.59
SMARCB1-203ENST00000407082 MEIKINA0A087WXM9 373 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 A0A1B0GTH9 108 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 A0A1W2PPL8 197 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 C17orf51A8MQB3 221 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 NME2P1O60361 137 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 CREBL2O60519 120 aaPredicted RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 CBR3O75828 277 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 NDUFB6O95139 128 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PNPP00491 289 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PGA4P0DJD7 388 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PGA3P0DJD8 388 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 SULT1A3P0DMM9 295 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 SULT1A4P0DMN0 295 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 IL11P20809 199 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 NME2P22392 152 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 BDKRB2P30411 391 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 MAGEB1P43366 347 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 GSK3AP49840 483 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 CCR6P51684 374 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 TAS2R19P59542 299 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 LSM6P62312 80 aaKnown RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 TLE4Q04727 773 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM176BQ3YBM2 270 aaPredicted RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PRAMEF20Q5VT98 475 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 MTFR2Q6P444 385 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 SLC25A47Q6Q0C1 308 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PGAP1Q75T13 922 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 GALNTL5Q7Z4T8 443 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 ADGRE4PQ86SQ3 457 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 KDM8Q8N371 416 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 SPICQ8N5J4 248 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 MEIOBQ8N635 442 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 OR10AC1Q8NH08 325 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF431Q8TF32 576 aaPredicted RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 CCDC107Q8WV48 283 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 TMEM41AQ96HV5 264 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 PIGQQ9BRB3 760 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 NUDT16L1Q9BRJ7 211 aaKnown RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 MED29Q9NX70 200 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 ING1Q9UK53 422 aaPredicted RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 DKKL1Q9UK85 242 aa11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 KLF13Q9Y2Y9 288 aaPredicted RBP11.37□□□□□ -0.59
SMARCB1-203ENST00000407082 TRAV18A0A075B6X5 111 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 LOC390937A0A1W2PQ73 354 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 G3V3Y1 287 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 KLRC4-KLRK1H3BQV0 150 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 C19orf84I3L1E1 186 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 SYT7O43581 403 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 EFNA2O43921 213 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 LPLP06858 475 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 ZNF20P17024 532 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 HOXB4P17483 251 aaPredicted RBP11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 RAB3AP20336 220 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 CNR1P21554 472 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 GNALP38405 381 aa11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 PSMA6P60900 246 aaKnown RBP11.36□□□□□ -0.59
SMARCB1-203ENST00000407082 GALK2Q01415 458 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms