RNA–Protein interactions for RNA: ENST00000399438.7

TRAPPC13-202, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TRAPPC13, Length 3,221 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-202ENST00000399438 ADPRHP54922 357 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TAS2R41P59536 307 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF630Q2M218 657 aaPredicted RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TRMT12Q53H54 448 aaKnown RBP5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 NXNL2Q5VZ03 156 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 METRNLQ641Q3 311 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 CASP12Q6UXS9 341 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SPAG16Q8N0X2 631 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 STPG3Q8N7X2 389 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR8D4Q8NGM9 314 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMEM255BQ8WV15 326 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ADAMTS14Q8WXS8 1223 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 PTH2Q96A98 100 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZFP3Q96NJ6 502 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 GABARAPL1Q9H0R8 117 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 C2orf42Q9NWW7 574 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 BABAM2Q9NXR7 383 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 DHDHQ9UQ10 334 aa5.48□□□□□ -1.53
TRAPPC13-202ENST00000399438 SDK2Q58EX2 2172 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TSPAN11A1L157 253 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 C17orf51A8MQB3 221 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 SERPINB7O75635 380 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 KCNK2O95069 426 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDRT1O95170 752 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 KLF8O95600 359 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 LALBAP00709 142 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 EGFP01133 1207 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 PET100P0DJ07 73 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 DDOSTP39656 456 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 UGT2B15P54855 530 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF45Q02386 682 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TPBGQ13641 420 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ST3GAL2Q16842 350 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 FAM27D1Q5T7N8 215 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF474Q6S9Z5 364 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CROCCP3Q8IVE0 287 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TMEM163Q8TC26 289 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF837Q96EG3 531 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 PITX2Q99697 317 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 GABARAPL3Q9BY60 117 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 BARHL1Q9BZE3 327 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CLN6Q9NWW5 311 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 MUTYHQ9UIF7 546 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 FBXL4Q9UKA2 621 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 SPTBN2O15020 2390 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 NUP210Q8TEM1 1887 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR5K3A6NET4 321 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 IMPA2O14732 288 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ARPC5O15511 151 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 SGCEO43556 437 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 SRPX2O60687 465 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CTSVO60911 334 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 RPLP0P05388 317 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 HCCSP53701 268 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 RPS25P62851 125 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CXADRP78310 365 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 OXA1LQ15070 435 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TOMM34Q15785 309 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 KLHL12Q53G59 568 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TIMM23BQ5SRD1 257 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZNF730Q6ZMV8 503 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 PQLC2Q6ZP29 291 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 TIPARPQ7Z3E1 657 aaKnown RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZAR1Q86SH2 424 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 NRMQ8IXM6 262 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR11L1Q8NGX0 322 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 ZBED6CLQ96FA7 236 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 CDX2Q99626 313 aaPredicted RBP5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 SLC17A9Q9BYT1 436 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 DLL3Q9NYJ7 618 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 C1RLQ9NZP8 487 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 COMMD3Q9UBI1 195 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 NDRG3Q9UGV2 375 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 DUSP13Q9UII6 198 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 RP1P56715 2156 aa5.47□□□□□ -1.53
TRAPPC13-202ENST00000399438 METTL15A6NJ78 407 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 LOC110117498-PIK3R3F6TDL0 507 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 REM1O75628 298 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 TSPAN13O95857 204 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 RAF1P04049 648 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 KITLGP21583 273 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 HIST1H1TP22492 207 aaPredicted RBP5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 CYB561P49447 251 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 RANP62826 216 aaKnown RBP5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 PRDX1Q06830 199 aaKnown RBP5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 AESQ08117 197 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 HNRNPA0Q13151 305 aaKnown RBP5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 SAXO2Q658L1 398 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 BHLHB9Q6PI77 547 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 C17orf107Q6ZR85 190 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 TTLL10Q6ZVT0 673 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 BMPERQ8N8U9 685 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR51A7Q8NH64 312 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 OR1F12Q8NHA8 337 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 MS4A6EQ96DS6 147 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 NEURL3Q96EH8 262 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 NKX3-1Q99801 234 aaPredicted RBP5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 PCGF1Q9BSM1 259 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 NDUFAF3Q9BU61 184 aa5.46□□□□□ -1.53
TRAPPC13-202ENST00000399438 KIR3DX1Q9H7L2 352 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms