RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZNF14P17017 642 aaPredicted RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 IL11P20809 199 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 EIF1P41567 113 aaKnown RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 SUPT4H1P63272 117 aaKnown RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 HGFACQ04756 655 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ARMC6Q6NXE6 501 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 BTNL8Q6UX41 500 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ANGPTL5Q86XS5 388 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 SLC22A24Q8N4F4 322 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 C19orf47Q8N9M1 422 aaKnown RBP12.44□□□□□ -0.42
APOB-202ENST00000399256 C20orf24Q9BUV8 137 aa12.44□□□□□ -0.42
APOB-202ENST00000399256 ARID1AO14497 2285 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 A0A0A6YYD4 124 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 MFNGO00587 321 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 BPNT1O95861 308 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 H2BFMP0C1H6 154 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 LYL1P12980 280 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 CLDN6P56747 220 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 TSC22D1Q15714 1073 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 OR2A2Q6IF42 318 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 EGLN1Q9GZT9 426 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 PRO3102Q9H379 93 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 FAM157AC9JC47 383 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 SOCS1O15524 211 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 MPIG6BO95866 241 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 HOXC4P09017 264 aaPredicted RBP12.43□□□□□ -0.42
APOB-202ENST00000399256 TBPP20226 339 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 SLC37A1P57057 533 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 PRTGQ2VWP7 1150 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 TMEM104Q8NE00 496 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 ST7LQ8TDW4 575 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 TMEM41AQ96HV5 264 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 SMIM3Q9BZL3 60 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 SLC26A1Q9H2B4 701 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 BANF2Q9H503 90 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 TINAGQ9UJW2 476 aa12.43□□□□□ -0.42
APOB-202ENST00000399256 A0A1W2PPH5 198 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 GP1BBP13224 206 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 HSD11B1P28845 292 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 PLAC9Q5JTB6 97 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 WDFY1Q8IWB7 410 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 ATXN7L1Q9ULK2 861 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 IGKV1D-43A0A0B4J1Z2 117 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 hCG_1809904A0A1W2PP81 198 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 A0A1W2PR64 198 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 A0A1W2PRV1 198 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 SDCBPO00560 298 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 SYT7O43581 403 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 SLC6A8P48029 635 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 DVL1P1P54792 670 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 AWAT1Q58HT5 328 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 EIF5AL1Q6IS14 154 aaKnown RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 NUP54Q7Z3B4 507 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 TMPRSS9Q7Z410 1059 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 POC1AQ8NBT0 407 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 SLC26A10Q8NG04 563 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 PTPMT1Q8WUK0 201 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 FAM131CQ96AQ9 280 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 C2orf50Q96LR7 162 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 IP6K3Q96PC2 410 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 RTBDNQ9BSG5 229 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 BCL2L14Q9BZR8 327 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 ZNF576Q9H609 170 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 SEBOXQ9HB31 216 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 KNL1Q8NG31 2342 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 TMED7-TICAM2A0A0A6YYA0 188 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 PLPP3O14495 311 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 ZNF354AO60765 605 aaPredicted RBP12.42□□□□□ -0.42
APOB-202ENST00000399256 RAD51DO75771 328 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 NQO2P16083 231 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 BCKDHBP21953 392 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 GLRA1P23415 457 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 CRABP1P29762 137 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 SULT1A2P50226 295 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 C1orf61Q13536 156 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 C1orf140Q5VVS0 124 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 ZNF561Q8N587 486 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
APOB-202ENST00000399256 A0A1W2PP11 408 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 M0R036 132 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
APOB-202ENST00000399256 MT-ATP6P00846 226 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 TTRP02766 147 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 HKR1P10072 659 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 HOXB2P14652 356 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 AGAP20933 346 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 ADH6P28332 368 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 NTSR1P30989 418 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 ZNF93P35789 620 aaPredicted RBP12.41□□□□□ -0.42
APOB-202ENST00000399256 GLIPR1L1Q6UWM5 242 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 MAFIPQ8WZ33 124 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 RAB3CQ96E17 227 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 TIMM10BQ9Y5J6 103 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 RD3LP0DJH9 198 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 HNRNPA2B1P22626 353 aaKnown RBP12.41□□□□□ -0.42
APOB-202ENST00000399256 IL12BP29460 328 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 Q6ZSR6 202 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
APOB-202ENST00000399256 OR13G1Q8NGZ3 307 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms