RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FAM3AP98173 230 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 RBM48Q5RL73 367 aaKnown RBP10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 FDX2Q6P4F2 183 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 KCTD20Q7Z5Y7 419 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 ELMOD2Q8IZ81 293 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR52H1Q8NGJ2 320 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR5L1Q8NGL2 311 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR2G2Q8NGZ5 317 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SPRYD4Q8WW59 207 aaPredicted RBP10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MBD6Q96DN6 1003 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 REEP6Q96HR9 211 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SORCS2Q96PQ0 1159 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR10A2Q9H208 303 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 Q9H521 79 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 MOB1AQ9H8S9 216 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 OR52A1Q9UKL2 312 aa10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 CAB39Q9Y376 341 aaPredicted RBP10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 SIRT4Q9Y6E7 314 aaPredicted RBP10.59□□□□□ -0.71
HLA-DQB1-203ENST00000399082 A0A0U1RQV5 110 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 A0A1B0GWJ7 208 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 A0A1W2PPW3 197 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 IQCF6A8MYZ5 107 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NAT2P11245 290 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PAX1P15863 534 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ACKR3P25106 362 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GTF2A1P52655 376 aaPredicted RBP10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SNRPD2P62316 118 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MALLQ13021 153 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GFOD2Q3B7J2 385 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RNLSQ5VYX0 342 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 Q6ZSR3 168 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PGAP1Q75T13 922 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MRPL21Q7Z2W9 205 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FAM220AQ7Z4H9 259 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 KRTAP1-3Q8IUG1 177 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR5AS1Q8N127 324 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 STX19Q8N4C7 294 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PLPP7Q8NBV4 271 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR52N1Q8NH53 320 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR51E1Q8TCB6 317 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RPS4Y2Q8TD47 263 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NINJ1Q92982 152 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CDCA4Q9BXL8 241 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PPP1R3EQ9H7J1 279 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MSL2Q9HCI7 577 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 FRRS1LQ9P0K9 344 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LSM2Q9Y333 95 aaKnown RBP10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SNX5Q9Y5X3 404 aa10.58□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR4C45A6NMZ5 311 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CD300LBA8K4G0 201 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 VSTM5A8MXK1 200 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 M0R233 179 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MLNRO43193 412 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TIMM8AO60220 97 aaPredicted RBP10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NCR1O76036 304 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LY6HO94772 140 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 IGHV1-46P01743 117 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 IGHV4-39P01824 125 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MYL12AP19105 171 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCL1P22362 96 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DNASE1P24855 282 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PTH2RP49190 550 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GSK3AP49840 483 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MED21Q13503 144 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR8B8Q15620 311 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TIGD6Q17RP2 521 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NKPD1Q17RQ9 610 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DEFB113Q30KQ7 82 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SPRNQ5BIV9 151 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 BCL2L15Q5TBC7 163 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 EGFL6Q8IUX8 553 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RDH10Q8IZV5 341 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 KLHL36Q8N4N3 616 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 NANOGP1Q8N7R0 232 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 BHLHE23Q8NDY6 225 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR8G5Q8NG78 346 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 OR56B2PQ8NGI1 322 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 PIGTQ969N2 578 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GSX2Q9BZM3 304 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TPK1Q9H3S4 243 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SP140LQ9H930 580 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 DYNLRB1Q9NP97 96 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GPR84Q9NQS5 396 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SCN3BQ9NY72 215 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 GTF2A1LQ9UNN4 478 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TPRKBQ9Y3C4 175 aa10.57□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TRIM64A6NGJ6 449 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 C17orf100A8MU93 164 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 H0YL77 283 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 P2RY10O00398 339 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 RGS10O43665 173 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 LMX1BO60663 402 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MT-ND5P03915 603 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ADH4P08319 380 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 TACSTD2P09758 323 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 MAGEB1P43366 347 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 CCR9P51686 369 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 SELENOVP59797 346 aa10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 HNRNPA0Q13151 305 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB1-203ENST00000399082 ALKBH1Q13686 389 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms