RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 TMEM269A0A1B0GVZ9 245 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 M0R129 80 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 SLC16A6O15403 523 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 MLNRO43193 412 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 MRPL3P09001 348 aaKnown RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ANPEPP15144 967 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ATP6V1B1P15313 513 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 CPT2P23786 658 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 CD200P41217 278 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 RIDAP52758 137 aaKnown RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 CXCR4P61073 352 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 FAM3AP98173 230 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ZIK1Q3SY52 487 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 C6orf52Q5T4I8 152 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF322Q6U7Q0 402 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 BCDIN3DQ7Z5W3 292 aaKnown RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 OR2AE1Q8NHA4 323 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ITLN1Q8WWA0 313 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 MEGF10Q96KG7 1140 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 Q96MT0 163 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 MYCBPQ99417 103 aaPredicted RBP12.08□□□□□ -0.48
HDDC2-202ENST00000398153 MOB1AQ9H8S9 216 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 GCM1Q9NP62 436 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 TMEM106BQ9NUM4 274 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 DNAJC27Q9NZQ0 273 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 KLHDC2Q9Y2U9 406 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 PCDHGB1Q9Y5G3 927 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 GMPPBQ9Y5P6 360 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 ABCA1O95477 2261 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 CSPG4Q6UVK1 2322 aa12.08□□□□□ -0.48
HDDC2-202ENST00000398153 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.07□□□□□ -0.48
HDDC2-202ENST00000398153 LOC100130705A0A1B0GUX0 176 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 hCG_38984A0A1B0GV85 526 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 LRRC30A6NM36 301 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 ANKRD30BLA7E2S9 258 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
HDDC2-202ENST00000398153 ATP6V1E1P36543 226 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 MTNR1AP48039 350 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 HCCSP53701 268 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 OR8G1Q15617 311 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 OR8B8Q15620 311 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 TRIP10Q15642 601 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 FAM166AQ6J272 317 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
HDDC2-202ENST00000398153 EGFL6Q8IUX8 553 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 C1orf87Q8N0U7 546 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 OR10AD1Q8NGE0 317 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 OR51G2Q8NGK0 314 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 CLDND2Q8NHS1 167 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 RAB39BQ96DA2 213 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 FAM118AQ9NWS6 357 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 SMPD3Q9NY59 655 aaPredicted RBP12.07□□□□□ -0.48
HDDC2-202ENST00000398153 WIPI2Q9Y4P8 454 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 N6AMT1Q9Y5N5 214 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 NPTNQ9Y639 398 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 DYSFO75923 2080 aa12.07□□□□□ -0.48
HDDC2-202ENST00000398153 TLN2Q9Y4G6 2542 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 LRP5LA4QPB2 252 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 B4DSR2 109 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 SULT1C4O75897 302 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 PCMT1P22061 227 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 CA6P23280 308 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 GSK3AP49840 483 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 CDH15P55291 814 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 ACTC1P68032 377 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 ACTA1P68133 377 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 MAB21L1Q13394 359 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 TMEM155Q4W5P6 130 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 KRT74Q7RTS7 529 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF555Q8NEP9 628 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 OR56B2PQ8NGI1 322 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 RHOXF1Q8NHV9 184 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 Q8TCH9 128 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
HDDC2-202ENST00000398153 DCLRE1BQ9H816 532 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 BRD7Q9NPI1 651 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 C14orf119Q9NWQ9 140 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 FAM206AQ9NX38 181 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 ZNF319Q9P2F9 582 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 NUFIP1Q9UHK0 495 aaKnown RBP12.06□□□□□ -0.48
HDDC2-202ENST00000398153 IKZF2Q9UKS7 526 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 COPS3Q9UNS2 423 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 CACNG2Q9Y698 323 aa12.06□□□□□ -0.48
HDDC2-202ENST00000398153 LOC100289279A0A1B0GTE1 492 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 C5orf63A6NC05 138 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 F5H5P2 479 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 H0YL77 283 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 TMEM178BH3BS89 294 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 TGFAP01135 160 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 HLA-DPB1P04440 258 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 KRT8P05787 483 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 GABRB1P18505 474 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 LMO4P61968 165 aa12.05□□□□□ -0.48
HDDC2-202ENST00000398153 MVKQ03426 396 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms