RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 A0A1B0GTL3 188 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 NKX2-1P43699 371 aaPredicted RBP10.23□□□□□ -0.77
TTC28-201ENST00000397906 PSMB3P49720 205 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 LILRA6Q6PI73 481 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 ZFAND2BQ8WV99 257 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 TAAR3PQ9P1P4 343 aa10.23□□□□□ -0.77
TTC28-201ENST00000397906 MAGEA5P43359 124 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ZNF266Q14584 549 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TMEM182Q6ZP80 229 aaPredicted RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 OR4C3Q8NH37 302 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ACY3Q96HD9 319 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 DHHO43323 396 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ZNF251Q9BRH9 671 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 CRISPLD2Q9H0B8 497 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 FAM53CQ9NYF3 392 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ZNF767PQ75MW2 155 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 NANOGP1Q8N7R0 232 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 LINC01555Q8NAE3 123 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 PCED1AQ9H1Q7 454 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 BCORQ6W2J9 1755 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 A0A0D9SG52 128 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 SULT1C2O00338 296 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 XRCC3O43542 346 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 SCGB1D1O95968 90 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 CBR1P16152 277 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 DUSP1P28562 367 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ARRB2P32121 409 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 PRSS12P56730 875 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 EXOSC2Q13868 293 aaKnown RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 RFPL4BQ6ZWI9 263 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TMEM102Q8N9M5 508 aaPredicted RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 TTC9Q92623 222 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 MOB3AQ96BX8 217 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 EGR3Q06889 387 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 RNPS1Q15287 305 aaKnown RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 GLCCI1Q86VQ1 547 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 SMRP1Q8NCR6 262 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 NUDCD2Q8WVJ2 157 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TMEM211Q6ICI0 200 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 OR1F12Q8NHA8 337 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 APOBEC3DQ96AK3 386 aaPredicted RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 MRGPRX3Q96LB0 322 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 C20orf24Q9BUV8 137 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 KIAA1551Q9HCM1 1747 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 ZNF205O95201 554 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 SNAPINO95295 136 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 C2orf76Q3KRA6 126 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TSEN54Q7Z6J9 526 aaKnown RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 NRTNQ99748 197 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TRDV1A0A1B0GX56 115 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TCRBP04435 133 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 PPP3CBP16298 524 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 Q56UQ5 140 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 IKZF5Q9H5V7 419 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 FZD6O60353 706 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 OR7C2O60412 319 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 GPBAR1Q8TDU6 330 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 FCRL1Q96LA6 429 aa10.22□□□□□ -0.77
TTC28-201ENST00000397906 TERTO14746 1132 aaKnown RBP10.22□□□□□ -0.77
TTC28-201ENST00000397906 HRH1P35367 487 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 DBPQ10586 325 aaPredicted RBP10.21□□□□□ -0.77
TTC28-201ENST00000397906 OSR2Q8N2R0 312 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 ADPRHL1Q8NDY3 354 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 SIGLEC11Q96RL6 698 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 ANGPTL7O43827 346 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 RHOXF1Q8NHV9 184 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 LPAR2Q9HBW0 351 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 TRABD2BA6NFA1 517 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 AMER3Q8N944 861 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 RBP4P02753 201 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 CT45A10P0DMU9 189 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 SLC36A1Q7Z2H8 476 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 SLC7A5P1Q8MH63 180 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 OR6S1Q8NH40 331 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 TVP23CQ96ET8 276 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 TCFL5Q9UL49 500 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 URGCP-MRPS24S4R325 110 aa10.21□□□□□ -0.77
TTC28-201ENST00000397906 FABP7O15540 132 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 OR2G3Q8NGZ4 309 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 FCGR2CP31995 323 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 GALNSP34059 522 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 DRD3P35462 400 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 RPS19P39019 145 aaKnown RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 ZNF85Q03923 595 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 SLC17A1Q14916 467 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 ZNF793Q6ZN11 406 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 PATZ1Q9HBE1 687 aaKnown RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 TAF9BQ9HBM6 251 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 MRPL22Q9NWU5 206 aaKnown RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 ZNF638Q14966 1978 aaKnown RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 OR13C7P0DN81 318 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 C17orf107Q6ZR85 190 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 ZFP62Q8NB50 900 aaPredicted RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 CORO2AQ92828 525 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 CLEC5AQ9NY25 188 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 FAM157AC9JC47 383 aa10.21□□□□□ -0.78
TTC28-201ENST00000397906 ZNF701M0R085 212 aaPredicted RBP10.21□□□□□ -0.78
TTC28-201ENST00000397906 CTXN2P0C2S0 81 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms