RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 PTGS2P35354 604 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 SLC35A1P78382 337 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ROM1Q03395 351 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 PPP1R1AQ13522 171 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ASPHD2Q6ICH7 369 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 LINC00696Q6ZRV3 163 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 TMPPEQ6ZT21 453 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 CLEC1AQ8NC01 280 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 NFAM1Q8NET5 270 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR2M3Q8NG83 312 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR5H2Q8NGV7 314 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 AKR7LQ8NHP1 331 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 POC1BQ8TC44 478 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 SAP25Q8TEE9 199 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 RNF133Q8WVZ7 376 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 URM1Q9BTM9 101 aaKnown RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 NARFLQ9H6Q4 476 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 B3GALT1Q9Y5Z6 326 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 LHFPL6Q9Y693 200 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR2M5A3KFT3 312 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 H3BMH7 237 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 SLC33A1O00400 549 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 NUP62P37198 522 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF84P51523 738 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 RAG2P55895 527 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 BTN1A1Q13410 526 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 CHRFAM7AQ494W8 412 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ATPAF1Q5TC12 328 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 HDDC2Q7Z4H3 204 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF441Q8N8Z8 693 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 SPERTQ8NA61 448 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 ARHGAP5-AS1Q96IT6 56 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OXGR1Q96P68 337 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 TWSG1Q9GZX9 223 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 CST11Q9H112 138 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 PCED1AQ9H1Q7 454 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 EHFQ9NZC4 300 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OPN4Q9UHM6 478 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 TEX13DA0A0J9YY54 714 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 C5orf63A6NC05 138 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 MSX1P28360 303 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 MTCP1P56278 107 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 GK2Q14410 553 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 TEX30Q5JUR7 227 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 WIPI1Q5MNZ9 446 aaPredicted RBP9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 SIGIRRQ6IA17 410 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 GPX8Q8TED1 209 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 PRRT1Q99946 306 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 PLEKHJ1Q9NW61 149 aa9.25□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR5H14A6NHG9 310 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 SERPINA5P05154 406 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 OPRM1P35372 400 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 HLXQ14774 488 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF468Q5VIY5 522 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 RAB12Q6IQ22 244 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 VASH2Q86V25 355 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 GPR137CQ8N3F9 429 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 NKAIN3Q8N8D7 197 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 WDSUB1Q8N9V3 476 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 DCUN1D4Q92564 292 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 FOXRED1Q96CU9 486 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 PHB2Q99623 299 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 VRK1Q99986 396 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 TAS2R3Q9NYW6 316 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 PIPOXQ9P0Z9 390 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF319Q9P2F9 582 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 IGHV3-64DA0A0J9YX35 117 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 SNRPGP15A8MWD9 76 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 HSPB6O14558 160 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 SPRY1O43609 319 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 TAF9Q16594 264 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 PPP1R1CQ8WVI7 109 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 HGDQ93099 445 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 ZNF837Q96EG3 531 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 NECAB3Q96P71 396 aaPredicted RBP9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 CYB5R1Q9UHQ9 305 aa9.24□□□□□ -0.93
CPSF1P1-201ENST00000397477 A0A096LPE4 126 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 A0A1W2PPZ6 126 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 TMEM200CA6NKL6 621 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 PMS2P2O95744 297 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 ITGA3P26006 1051 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 PDZD9Q8IXQ8 264 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 DEFB123Q8N688 67 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR10R2Q8NGX6 335 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 NAA11Q9BSU3 229 aaPredicted RBP9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 PTTG3PQ9NZH4 202 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 FAM166BA8MTA8 275 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 IL5P05113 134 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 MSR1P21757 451 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 HTR5AP47898 357 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 ATP1B3P54709 279 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 CARD18P57730 90 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 RSU1Q15404 277 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 PXDC1Q5TGL8 231 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 SEZ6L2Q6UXD5 910 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 PEG10Q86TG7 708 aaKnown RBP9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR5T2Q8NGG2 359 aa9.23□□□□□ -0.93
CPSF1P1-201ENST00000397477 OR10S1Q8NGN2 331 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms