RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 OR52A1Q9UKL2 312 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 CACNG2Q9Y698 323 aa13.04□□□□□ -0.32
CAPN3-207ENST00000397200 ANXA2P2A6NMY6 339 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 DHHO43323 396 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 CNOT4O95628 575 aaKnown RBP13.03□□□□□ -0.32
CAPN3-207ENST00000397200 ANXA2P07355 339 aaKnown RBP13.03□□□□□ -0.32
CAPN3-207ENST00000397200 UBCP0CG48 685 aaKnown RBP13.03□□□□□ -0.32
CAPN3-207ENST00000397200 DDOSTP39656 456 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 DGCR2P98153 550 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF704Q6ZNC4 412 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-207ENST00000397200 FOXL2NBQ6ZUU3 175 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 LINGO2Q7L985 606 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 DTX3Q8N9I9 347 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 ZBTB8BQ8NAP8 495 aaPredicted RBP13.03□□□□□ -0.32
CAPN3-207ENST00000397200 OR10H5Q8NGA6 315 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 OR10S1Q8NGN2 331 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 CREB3L1Q96BA8 519 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 SLAMF6Q96DU3 332 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 CCDC120Q96HB5 630 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 FAM206AQ9NX38 181 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 COQ3Q9NZJ6 369 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 STEAP1Q9UHE8 339 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 HHLA2Q9UM44 414 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 DHDHQ9UQ10 334 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 LHFPL6Q9Y693 200 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 CHD6Q8TD26 2715 aa13.03□□□□□ -0.32
CAPN3-207ENST00000397200 EEF1E1-BLOC1S5C9J1V9 151 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 RPL36A-HNRNPH2H7BZ11 118 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 PTH2RP49190 550 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 CLDN12P56749 244 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 BTG1P62324 171 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 MRPS10P82664 201 aaKnown RBP13.02□□□□□ -0.32
CAPN3-207ENST00000397200 ADORA2A-AS1P86434 159 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 KLF9Q13886 244 aaPredicted RBP13.02□□□□□ -0.32
CAPN3-207ENST00000397200 CEACAM16Q2WEN9 425 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 DNM1P46Q6ZS02 220 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 Q6ZT83 130 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 GLCCI1Q86VQ1 547 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 ZNF610Q8N9Z0 462 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 DNAAF1Q8NEP3 725 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 SLC7A6Q92536 515 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 PPP1R14AQ96A00 147 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 C1orf198Q9H425 327 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 NLKQ9UBE8 527 aa13.02□□□□□ -0.32
CAPN3-207ENST00000397200 RBMX2Q9Y388 322 aaKnown RBP13.02□□□□□ -0.32
CAPN3-207ENST00000397200 LOC107986453A0A1B0GWG9 222 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 A0A1W2PPL8 197 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 GABARAPH6UMI1 98 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 SLC17A2O00624 439 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 MSTNO14793 375 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 CCNKO75909 580 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 CD2P06729 351 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 H2BFMP0C1H6 154 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 GUCA1AP43080 201 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-207ENST00000397200 DYRK1AQ13627 763 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 STK11Q15831 433 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 TATDN3Q17R31 274 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 ODF4Q2M2E3 257 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 TMEM244Q5VVB8 128 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 BEND4Q6ZU67 534 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 LUZP2Q86TE4 346 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 SYNPRQ8TBG9 265 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF837Q96EG3 531 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-207ENST00000397200 ST6GAL2Q96JF0 529 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 MOB1AQ9H8S9 216 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 SEC61A2Q9H9S3 476 aa13.02□□□□□ -0.33
CAPN3-207ENST00000397200 ERRFI1Q9UJM3 462 aaPredicted RBP13.02□□□□□ -0.33
CAPN3-207ENST00000397200 TMEM269A0A1B0GVZ9 245 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 MAS1P04201 325 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 CD3GP09693 182 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 MPGP29372 298 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 CHRNB4P30926 498 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 ART1P52961 327 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 PSMA6P60900 246 aaKnown RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 C9orf135Q5VTT2 229 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 RSBN1Q5VWQ0 802 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 MRGPRGQ86SM5 289 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 LYPD6Q86Y78 171 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 LIX1LQ8IVB5 337 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 C15orf40Q8WUR7 153 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 S100A16Q96FQ6 103 aaKnown RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 NIPAL2Q9H841 368 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 SLC17A5Q9NRA2 495 aa13.01□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF275Q9NSD4 429 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 GDF2Q9UK05 429 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
CAPN3-207ENST00000397200 PCNX1Q96RV3 2341 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 LOC390937A0A1W2PQ73 354 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 ZNF878C9JN71 531 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 ORC5O43913 435 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 ITGA5P08648 1049 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 FOXG1P55316 489 aaPredicted RBP13□□□□□ -0.33
CAPN3-207ENST00000397200 ATAD3CQ5T2N8 411 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 BCL2L15Q5TBC7 163 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 ELMOD2Q8IZ81 293 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 TOMM5Q8N4H5 51 aa13□□□□□ -0.33
CAPN3-207ENST00000397200 RELL2Q8NC24 303 aaPredicted RBP13□□□□□ -0.33
CAPN3-207ENST00000397200 FOXB1Q99853 325 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms