RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 MAMDC2Q7Z304 686 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 PRR22Q8IZ63 422 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OR52N5Q8NH56 324 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ELSPBP1Q96BH3 223 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 C8orf44Q96CB5 159 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ADOQ96SZ5 270 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CDC6Q99741 560 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 NMES1Q9C002 83 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 PRDM13Q9H4Q3 707 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CNTD2Q9H8S5 307 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 GFOD1Q9NXC2 390 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OR52A1Q9UKL2 312 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 WASF3Q9UPY6 502 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 P2RY10O00398 339 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 S100A2P29034 98 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 GSK3AP49840 483 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ZP2Q05996 745 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 FUT7Q11130 342 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 PNLIPRP3Q17RR3 467 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 C1orf100Q5SVJ3 147 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ARMC6Q6NXE6 501 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 FRMD1Q8N878 549 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 NKAIN3Q8N8D7 197 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 AVL9Q8NBF6 648 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 S1PR5Q9H228 398 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CENPMQ9NSP4 180 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 COA3Q9Y2R0 106 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 AMDHD2Q9Y303 409 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 MMP24Q9Y5R2 645 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 R4GMQ9 66 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 A0A087X0M5 115 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TRBV6-7A0A0A0MS04 114 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TMEM269A0A1B0GVZ9 245 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 A0A1B0GX30 115 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 C17orf51A8MQB3 221 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 SOX15O60248 233 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ADAP1O75689 374 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 BGLAPP02818 100 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OR8U9P0C7N5 309 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ZNF823P16415 610 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 RPS10P46783 165 aaKnown RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 RBP2P50120 134 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CAV2P51636 162 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 STARD6P59095 220 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TAS2R31P59538 309 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 SHHQ15465 462 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TOMM34Q15785 309 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-206ENST00000397163 DRAM2Q6UX65 266 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ZNF615Q8N8J6 731 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OR8U1Q8NH10 309 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OR4K15Q8NH41 348 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 PTX4Q96A99 478 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 FGGYQ96C11 551 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 BMFQ96LC9 184 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 TMEM68Q96MH6 324 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 OCSTAMPQ9BR26 566 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 SOX7Q9BT81 388 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 RAB33BQ9H082 229 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ZDHHC8Q9ULC8 765 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 KNL1Q8NG31 2342 aa8.18□□□□□ -1.1
CAPN3-206ENST00000397163 ARHGEF17Q96PE2 2063 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 TRAV36DV7A0A075B6V5 113 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 IGLV1-36A0A0B4J1U3 117 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 TCAPO15273 167 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 COX5BP10606 129 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 MPZP25189 248 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 NPY4RP50391 375 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 GLO1Q04760 184 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 EBPQ15125 230 aaKnown RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 RSU1Q15404 277 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 OR2A2Q6IF42 318 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 LINC00346Q8IVM7 164 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 UBAC2Q8NBM4 344 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 NXF5Q9H1B4 397 aaKnown RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 METTL8Q9H825 291 aaKnown RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 OR5AC2Q9NZP5 309 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 DNAJB11Q9UBS4 358 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 DBX1A6NMT0 343 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 C17orf105B2RV13 164 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 MBTPS2O43462 519 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 PI3P19957 117 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 S100A10P60903 97 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 UNC119Q13432 240 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 TMEM128Q5BJH2 165 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 C9orf50Q5SZB4 431 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 TMEM244Q5VVB8 128 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 AWAT2Q6E213 333 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 RTN4RL2Q86UN3 420 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 OR52N4Q8NGI2 321 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 CD300LFQ8TDQ1 290 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 KIRREL1Q96J84 757 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 GAL3ST4Q96RP7 486 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 PNO1Q9NRX1 252 aaKnown RBP8.17□□□□□ -1.1
CAPN3-206ENST00000397163 GSKIPQ9P0R6 139 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 WIF1Q9Y5W5 379 aa8.17□□□□□ -1.1
CAPN3-206ENST00000397163 LOC101059948A0A1B0GTJ6 334 aa8.16□□□□□ -1.1
CAPN3-206ENST00000397163 LOC390937A0A1W2PQ73 354 aa8.16□□□□□ -1.1
CAPN3-206ENST00000397163 PRAMEF26H0Y7S4 382 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms