RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 MAFIPQ8WZ33 124 aa12.34□□□□□ -0.43
NUP98-204ENST00000397004 PBOV1Q9GZY1 135 aa12.34□□□□□ -0.43
NUP98-204ENST00000397004 RCC2Q9P258 522 aaKnown RBP12.34□□□□□ -0.43
NUP98-204ENST00000397004 MLXQ9UH92 298 aa12.34□□□□□ -0.43
NUP98-204ENST00000397004 ANAPC10Q9UM13 185 aa12.34□□□□□ -0.43
NUP98-204ENST00000397004 MEGF11A6BM72 1044 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 KLK2P20151 261 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 HSD11B1P28845 292 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 IL12BP29460 328 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 FAHD2BQ6P2I3 314 aaPredicted RBP12.33□□□□□ -0.43
NUP98-204ENST00000397004 C1QL2Q7Z5L3 287 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 OR4K15Q8NH41 348 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 OR51E1Q8TCB6 317 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 RLN3Q8WXF3 142 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 FAHD2AQ96GK7 314 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 TBL1XR1Q9BZK7 514 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 NMES1Q9C002 83 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 HRH4Q9H3N8 390 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 FBRSQ9HAH7 460 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 ZNF304Q9HCX3 659 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 CYP8B1Q9UNU6 501 aa12.33□□□□□ -0.43
NUP98-204ENST00000397004 COLCA2A8K830 154 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 PLCXD2Q0VAA5 305 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 TERB2Q8NHR7 220 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 SLC5A7Q9GZV3 580 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 B3GAT1Q9P2W7 334 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 SDK1Q7Z5N4 2213 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 A0A1W2PQD3 144 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 BLACEA4D250 179 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 LYL1P12980 280 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 PVALBP20472 110 aaPredicted RBP12.33□□□□□ -0.44
NUP98-204ENST00000397004 CFHR1Q03591 330 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 RAB32Q13637 225 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 PNLIPRP3Q17RR3 467 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 Q6ZS52 159 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 NKAIN3Q8N8D7 197 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 SLAMF6Q96DU3 332 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 NRIP2Q9BQI9 281 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.33□□□□□ -0.44
NUP98-204ENST00000397004 SOHLH2Q9NX45 425 aa12.33□□□□□ -0.44
NUP98-204ENST00000397004 IGKV1-9A0A0C4DH69 117 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 SDCBPO00560 298 aaPredicted RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 OPN1LWP04000 364 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 PGCP20142 388 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 CDAP32320 146 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 AKR1C3P42330 323 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 POU3F1Q03052 451 aaPredicted RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 ELAVL1Q15717 326 aaKnown RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 CDCP2Q5VXM1 449 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 OR2A2Q6IF42 318 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 DEFB119Q8N690 84 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 OR13G1Q8NGZ3 307 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 CUTCQ9NTM9 273 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 LPAR3Q9UBY5 353 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 PIAS3Q9Y6X2 628 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 IGKV1D-8A0A087WSZ0 117 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 GLRA1P23415 457 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 TGIF1Q15583 401 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 RAB11FIP2Q7L804 512 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 OR2S2Q9NQN1 319 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 LHFPL6Q9Y693 200 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 NCOA6Q14686 2063 aaPredicted RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 CEACAM18A8MTB9 384 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 ZNF705EA8MWA4 302 aaPredicted RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 ZNF814B7Z6K7 855 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 TO15178 435 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 CRABP1P29762 137 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 SLC6A9P48067 706 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 NAAAQ02083 359 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 RPL7L1Q6DKI1 246 aaKnown RBP12.32□□□□□ -0.44
NUP98-204ENST00000397004 GRINAQ7Z429 371 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 ADAMTS17Q8TE56 1095 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 PCDHGA1Q9Y5H4 931 aa12.32□□□□□ -0.44
NUP98-204ENST00000397004 BPNT1O95861 308 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 H2BFMP0C1H6 154 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 HABP2Q14520 560 aaPredicted RBP12.31□□□□□ -0.44
NUP98-204ENST00000397004 TMEM128Q5BJH2 165 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 TMEM244Q5VVB8 128 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 AWAT2Q6E213 333 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 ZNF704Q6ZNC4 412 aaPredicted RBP12.31□□□□□ -0.44
NUP98-204ENST00000397004 SLC22A24Q8N4F4 322 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 RNF141Q8WVD5 230 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 ARHGAP5-AS1Q96IT6 56 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 MMP26Q9NRE1 261 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 EXPH5Q8NEV8 1989 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 LRP3O75074 770 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 ACAA1P09110 424 aaPredicted RBP12.31□□□□□ -0.44
NUP98-204ENST00000397004 CBX5P45973 191 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 EMP2P54851 167 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 PJVKQ0ZLH3 352 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
NUP98-204ENST00000397004 NSDHLQ15738 373 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 RAB30Q15771 203 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 PEG10Q86TG7 708 aaKnown RBP12.31□□□□□ -0.44
NUP98-204ENST00000397004 ADAMTS18Q8TE60 1221 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 SMIM8Q96KF7 97 aa12.31□□□□□ -0.44
NUP98-204ENST00000397004 SEC11CQ9BY50 192 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms