RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 ST8SIA5O15466 376 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 LIMS3P0CW19 117 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 LIMS4P0CW20 117 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 CCL11P51671 97 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF66Q6ZN08 573 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 SDF2Q99470 211 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 ADGRL4Q9HBW9 690 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 FGF21Q9NSA1 209 aa12.7□□□□□ -0.38
COL4A3-202ENST00000396578 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 PET117Q6UWS5 81 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ZDHHC23Q8IYP9 409 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 IFI44Q8TCB0 444 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM230Q96A57 120 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 CTRCQ99895 268 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 XRCC2O43543 280 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 S100A4P26447 101 aaKnown RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 STAC2Q6ZMT1 411 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 EDARADDQ8WWZ3 215 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 HGDQ93099 445 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 H3BNC9 293 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 FZD6O60353 706 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 NOVA1P51513 510 aaKnown RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 FAM78AQ5JUQ0 283 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ARHGEF39Q8N4T4 335 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ARIH2OSQ8N7S6 290 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 BCL2L2Q92843 193 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 RCL1Q9Y2P8 373 aaKnown RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 PI3P19957 117 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 SLC19A1P41440 591 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 MENTQ9BUN1 341 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 NXF2Q9GZY0 626 aaKnown RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 HINT3Q9NQE9 182 aaKnown RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 DNAJC13O75165 2243 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 XKR7Q5GH72 579 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ANKRD16Q6P6B7 361 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 GLCCI1Q86VQ1 547 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 BCORP1Q8N888 145 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 KIAA1958Q8N8K9 716 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 POM121L2Q96KW2 1035 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 MAGT1Q9H0U3 335 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 TRIP12Q14669 1992 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ACSM5Q6NUN0 579 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ABI3BPQ7Z7G0 1075 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 SCN8AQ9UQD0 1980 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 GJA4P35212 333 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 TOMM34Q15785 309 aaPredicted RBP12.69□□□□□ -0.38
COL4A3-202ENST00000396578 PNLIPRP3Q17RR3 467 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF385BQ569K4 471 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 METRNLQ641Q3 311 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 C11orf87Q6NUJ2 197 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 SLC16A12Q6ZSM3 486 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 OR13C5Q8NGS8 318 aa12.69□□□□□ -0.38
COL4A3-202ENST00000396578 DUS4LO95620 317 aaKnown RBP12.68□□□□□ -0.38
COL4A3-202ENST00000396578 GNB2P62879 340 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PAX5Q02548 391 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PMS2P11Q13670 270 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 OR52B4Q8NGK2 314 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 CHAC2Q8WUX2 184 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 ADIPOR1Q96A54 375 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 ARRDC3Q96B67 414 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 HOXC11O43248 304 aaPredicted RBP12.68□□□□□ -0.38
COL4A3-202ENST00000396578 HPP00738 406 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 RFC3P40938 356 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 DIO1P49895 249 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 GPNMBQ14956 572 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PPT2Q9UMR5 302 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 LSM2Q9Y333 95 aaKnown RBP12.68□□□□□ -0.38
COL4A3-202ENST00000396578 SCN9AQ15858 1988 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 SLX4Q8IY92 1834 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 TRAV1-2A0A0B4J238 106 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 TOX3O15405 576 aaPredicted RBP12.68□□□□□ -0.38
COL4A3-202ENST00000396578 GPM6AP51674 278 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PJVKQ0ZLH3 352 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM128Q5BJH2 165 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
COL4A3-202ENST00000396578 OR10D4PQ8NGN7 298 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 NUDCD2Q8WVJ2 157 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 LRFN3Q9BTN0 628 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PBOV1Q9GZY1 135 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 BMI1P35226 326 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 ZNF628Q5EBL2 1059 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 MORN1Q5T089 497 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 SYS1Q8N2H4 156 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 OR4C16Q8NGL9 310 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 TMEM229BQ8NBD8 167 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 SPACA5Q96QH8 159 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 CKAP5Q14008 2032 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 PRSS37A4D1T9 235 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 CST2P09228 141 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 OR1D5P58170 312 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 TCTEX1D1Q8N7M0 179 aa12.68□□□□□ -0.38
COL4A3-202ENST00000396578 CSF2RBP32927 897 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 CLN3Q13286 438 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 OLIG3Q7RTU3 272 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 RDH5Q92781 318 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ADGRG7Q96K78 797 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 TINAGL1Q9GZM7 467 aaPredicted RBP12.67□□□□□ -0.38
COL4A3-202ENST00000396578 BET1LQ9NYM9 111 aa12.67□□□□□ -0.38
COL4A3-202ENST00000396578 ST3GAL6Q9Y274 331 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms