RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 PMS2P1A4D2B8 440 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 OR5H15A6NDH6 313 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 SSX5O60225 188 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 IFNA7P01567 189 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 ERCC1P07992 297 aaPredicted RBP14.58□□□□□ -0.07
TRIM39-205ENST00000396551 NFYAP23511 347 aaPredicted RBP14.58□□□□□ -0.07
TRIM39-205ENST00000396551 CTSSP25774 331 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 SCGB2B2Q4G0G5 96 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 GLIPR1L1Q6UWM5 242 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 CD163Q86VB7 1156 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 TMEM41AQ96HV5 264 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 NELFAQ9H3P2 528 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 MRPS28Q9Y2Q9 187 aaKnown RBP14.58□□□□□ -0.07
TRIM39-205ENST00000396551 AUP1Q9Y679 476 aa14.58□□□□□ -0.07
TRIM39-205ENST00000396551 IGKV1-9A0A0C4DH69 117 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 NPIPA2E9PIF3 369 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 NPIPA3F8WFD2 350 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 H3BUI4 141 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 L7N2F9 121 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 B3GALT5-AS1P59052 145 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 RSPO1Q2MKA7 263 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-205ENST00000396551 DMRTC1Q5HYR2 192 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 TCEAL6Q6IPX3 200 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 DOK3Q7L591 496 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 ZNF101Q8IZC7 436 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 OR10R2Q8NGX6 335 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 SSC4DQ8WTU2 575 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 TCEAL3Q969E4 200 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 SELENOIQ9C0D9 397 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 MYOZ1Q9NP98 299 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-205ENST00000396551 UBQLN2Q9UHD9 624 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 VSIG4Q9Y279 399 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 CBR3O75828 277 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 IGLV3-1P01715 115 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 RAC1P63000 192 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 PGAP1Q75T13 922 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 DEFB123Q8N688 67 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 FOXD3Q9UJU5 478 aaPredicted RBP14.58□□□□□ -0.08
TRIM39-205ENST00000396551 FBXO4Q9UKT5 387 aa14.58□□□□□ -0.08
TRIM39-205ENST00000396551 A0A1W2PP11 408 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 B4E171 279 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 STK17BO94768 372 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 VAMP5O95183 116 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 TSPAN7P41732 249 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 ESCO2Q56NI9 601 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 LY6G6FQ5SQ64 297 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 CRIP3Q6Q6R5 217 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 LRRC18Q8N456 261 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 CCDC107Q8WV48 283 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 SLC39A7Q92504 469 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 ZNF837Q96EG3 531 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-205ENST00000396551 LIN37Q96GY3 246 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-205ENST00000396551 SFXN2Q96NB2 322 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 NAA11Q9BSU3 229 aaPredicted RBP14.57□□□□□ -0.08
TRIM39-205ENST00000396551 ZDBF2Q9HCK1 2354 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 RTTNQ86VV8 2226 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 DHHO43323 396 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 NR2C1P13056 603 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 OTX2P32243 289 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 SEC61A1P61619 476 aaKnown RBP14.57□□□□□ -0.08
TRIM39-205ENST00000396551 HIST1H3AP68431 136 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 MPPED2Q15777 294 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 HIST2H3PS2Q5TEC6 136 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 HIST2H3AQ71DI3 136 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 SLC2A8Q9NY64 477 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 KCNK7Q9Y2U2 307 aa14.57□□□□□ -0.08
TRIM39-205ENST00000396551 ACP1P24666 158 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 P2RX3P56373 397 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 CSNK2A1P68400 391 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 MEF2DQ14814 521 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 RNASE10Q5GAN6 216 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 CLLU1Q5K131 121 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 TIPARPQ7Z3E1 657 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 C12orf45Q8N5I9 185 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 PGAM5Q96HS1 289 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 OR6C65A6NJZ3 312 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 DISC1C4P0D8 188 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 SMAD9O15198 467 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 LIPCP11150 499 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 RSPO4Q2I0M5 234 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 OR2W3Q7Z3T1 314 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 YRDCQ86U90 279 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 ESX1Q8N693 406 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 GJC3Q8NFK1 279 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 ZNF775Q96BV0 537 aaPredicted RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 PIGQQ9BRB3 760 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 NUDT16L1Q9BRJ7 211 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 RBM24Q9BX46 236 aaKnown RBP14.56□□□□□ -0.08
TRIM39-205ENST00000396551 BANF2Q9H503 90 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 TCFL5Q9UL49 500 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 CNTRLQ7Z7A1 2325 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 HMSDA8MTL9 139 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 ARPC5O15511 151 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 SOCS1O15524 211 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 CDC14BO60729 498 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 MPIG6BO95866 241 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 GP1BAP07359 652 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 HCKP08631 526 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 CD96P40200 585 aa14.56□□□□□ -0.08
TRIM39-205ENST00000396551 GSK3AP49840 483 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms