RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 ST6GALNAC3Q8NDV1 305 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
TRIM39-204ENST00000396548 REEP6Q96HR9 211 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 FAM71F1Q96KD3 344 aaPredicted RBP11.02□□□□□ -0.65
TRIM39-204ENST00000396548 SP140LQ9H930 580 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 N6AMT1Q9Y5N5 214 aa11.02□□□□□ -0.65
TRIM39-204ENST00000396548 TLN1Q9Y490 2541 aaKnown RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 IGKV1-9A0A0C4DH69 117 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 A6NIN4 97 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 TBX1O43435 398 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 CCL2P13500 99 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 ELK1P19419 428 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 ACKR3P25106 362 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 DCTN2Q13561 401 aaKnown RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 C1orf100Q5SVJ3 147 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 OR2AE1Q8NHA4 323 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 TRMT10AQ8TBZ6 339 aaKnown RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 MS4A3Q96HJ5 214 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 CMTM3Q96MX0 182 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 RGCCQ9H4X1 137 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 CYSLTR2Q9NS75 346 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 SPATA2Q9UM82 520 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 C5orf49A4QMS7 147 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 EIF4EP06730 217 aaKnown RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 CELA3BP08861 270 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 PSMD7P51665 324 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 FAM3AP98173 230 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF92Q03936 586 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 OR8B8Q15620 311 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 HES5Q5TA89 166 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 LUZP2Q86TE4 346 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 OR1M1Q8NGA1 313 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 PIGMQ9H3S5 423 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 PALMDQ9NP74 551 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 ZNF629Q9UEG4 869 aaPredicted RBP11.01□□□□□ -0.65
TRIM39-204ENST00000396548 OR5V1Q9UGF6 321 aa11.01□□□□□ -0.65
TRIM39-204ENST00000396548 A8MXE2 369 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 IGLV1-44P01699 117 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 LCATP04180 440 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 CALCBP10092 127 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 RIN1Q13671 783 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 LY6DQ14210 128 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 TMEM42Q69YG0 159 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 UTS2BQ765I0 119 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 LIX1LQ8IVB5 337 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 OR5D14Q8NGL3 314 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 POFUT1Q9H488 388 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 PPP1R3EQ9H7J1 279 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 LIN7BQ9HAP6 207 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 CKLFQ9UBR5 152 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 STEAP1Q9UHE8 339 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 SLC17A2O00624 439 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 RGS5O15539 181 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 CBR1P16152 277 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 THBS4P35443 961 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 SCAND1P57086 179 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 NCCRP1Q6ZVX7 275 aaPredicted RBP11□□□□□ -0.65
TRIM39-204ENST00000396548 PGAP1Q75T13 922 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
TRIM39-204ENST00000396548 RNF144BQ7Z419 303 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 FAM169BQ8N8A8 192 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 SLC25A38Q96DW6 304 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 REPIN1Q9BWE0 567 aaKnown RBP11□□□□□ -0.65
TRIM39-204ENST00000396548 ANXA2P2A6NMY6 339 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 MSTNO14793 375 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 ALDOBP05062 364 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 OPRM1P35372 400 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 CDH26Q8IXH8 852 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 NKAIN3Q8N8D7 197 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 LGALS14Q8TCE9 139 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 MRI1Q9BV20 369 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 OBP2BQ9NPH6 170 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
TRIM39-204ENST00000396548 A0A1W2PR80 420 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 MEGF11A6BM72 1044 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 XRCC2O43543 280 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 SULT1B1O43704 296 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 SPOCK1Q08629 439 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 UBE2V2Q15819 145 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 GFOD2Q3B7J2 385 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 CNIH2Q6PI25 160 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 METAP1DQ6UB28 335 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 LRRC28Q86X40 367 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 RELL2Q8NC24 303 aaPredicted RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 SLC30A7Q8NEW0 376 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 OR52N4Q8NGI2 321 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 VKORC1Q9BQB6 163 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 CHST5Q9GZS9 411 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 SRRQ9GZT4 340 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 CIB4A0PJX0 185 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 OR5H1A6NKK0 313 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 LDLRAD4O15165 306 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 NGFP01138 241 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 PSMB1P20618 241 aaKnown RBP10.99□□□□□ -0.65
TRIM39-204ENST00000396548 PTBP1P26599 531 aaKnown RBP eCLIP10.99□□□□□ -0.653e-7■■■■□ 24.4
TRIM39-204ENST00000396548 BDKRB2P30411 391 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 GSK3AP49840 483 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 CLDN12P56749 244 aa10.99□□□□□ -0.65
TRIM39-204ENST00000396548 PLP2Q04941 152 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms