RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 KLF13Q9Y2Y9 288 aaPredicted RBP13.13□□□□□ -0.31
CBX3-202ENST00000396386 DCHS1Q96JQ0 3298 aa13.13□□□□□ -0.31
CBX3-202ENST00000396386 E9PLN8 166 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 DHRS3O75911 302 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 CELA3AP09093 270 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 SULT1A3P0DMM9 295 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 SULT1A4P0DMN0 295 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 VSIG8P0DPA2 414 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 TAS2R19P59542 299 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ECH1Q13011 328 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 SF3B4Q15427 424 aaKnown RBP eCLIP13.12□□□□□ -0.314e-17■□□□□ 8.6
CBX3-202ENST00000396386 OR2W3Q7Z3T1 314 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 TMEM229BQ8NBD8 167 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 SLC6A15Q9H2J7 730 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 V9GYS6 101 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 C5orf63A6NC05 138 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 SMLR1H3BR10 107 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 NME2P1O60361 137 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ICMTO60725 284 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 B4GALT1P15291 398 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 NME2P22392 152 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 CRYGSP22914 178 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 MAGEA5P43359 124 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 MECP2P51608 486 aaKnown RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 NUBP1P53384 320 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 CLDN18P56856 261 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 TNK1Q13470 666 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 STEAP1BQ6NZ63 245 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 NAA40Q86UY6 237 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ANGPTL5Q86XS5 388 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ZNF101Q8IZC7 436 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 GABRG1Q8N1C3 465 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 PAQR4Q8N4S7 273 aaPredicted RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 MEIOBQ8N635 442 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 MDS2Q8NDY4 140 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 DEFB124Q8NES8 71 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 FOXB1Q99853 325 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 NUDT16L1Q9BRJ7 211 aaKnown RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 GINS4Q9BRT9 223 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 OR10A2Q9H208 303 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 GPN1Q9HCN4 374 aaPredicted RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 PLSCR3Q9NRY6 295 aa13.12□□□□□ -0.31
CBX3-202ENST00000396386 ZNF107Q9UII5 783 aaPredicted RBP13.12□□□□□ -0.31
CBX3-202ENST00000396386 IGKV3D-15A0A087WSY6 115 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 TMEM235A6NFC5 223 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 HPXP02790 462 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 CD3DP04234 171 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 IL5P05113 134 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 SP1P08047 785 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 DBHP09172 617 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 FTH1P19P0C7X4 201 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 RCVRNP35243 200 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 RAD52P43351 418 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 MEOX1P50221 254 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 TCF15Q12870 199 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 RSPO1Q2MKA7 263 aaPredicted RBP13.11□□□□□ -0.31
CBX3-202ENST00000396386 CEACAM16Q2WEN9 425 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 DRAM2Q6UX65 266 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 GLDNQ6ZMI3 551 aaPredicted RBP13.11□□□□□ -0.31
CBX3-202ENST00000396386 Q6ZSR3 168 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 Q6ZTK2 550 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 TMEM251Q8N6I4 163 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 ASCC1Q8N9N2 400 aaKnown RBP13.11□□□□□ -0.31
CBX3-202ENST00000396386 OR4D10Q8NGI6 311 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 OR52H1Q8NGJ2 320 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 OR1F12Q8NHA8 337 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 AQP3Q92482 292 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 SPACA5Q96QH8 159 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 GPER1Q99527 375 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 TMEM246Q9BRR3 403 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 GPR35Q9HC97 309 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 ING4Q9UNL4 249 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 BOLA1Q9Y3E2 137 aa13.11□□□□□ -0.31
CBX3-202ENST00000396386 MEIKINA0A087WXM9 373 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 RAB27BO00194 218 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 SYNGR3O43761 229 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 MTRF1O75570 445 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 SYNGR4O95473 234 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 CYB5AP00167 134 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 UBBP0CG47 229 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZNF708P17019 499 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 CXCL3P19876 107 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 OR3A4PP47883 348 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 GSK3AP49840 483 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 SRYQ05066 204 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 ZNF260Q3ZCT1 412 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 GLIPR1L1Q6UWM5 242 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 GALNT16Q8N428 558 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 PP6455Q8WZ26 134 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 C10orf35Q96D05 121 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 MED30Q96HR3 178 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 FAM210AQ96ND0 272 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 SLA2Q9H6Q3 261 aa13.1□□□□□ -0.31
CBX3-202ENST00000396386 NOSIPQ9Y314 301 aaKnown RBP13.1□□□□□ -0.31
CBX3-202ENST00000396386 WDFY3Q8IZQ1 3526 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms