RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 FADS1O60427 444 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GLSO94925 669 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CD83Q01151 205 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CFHR1Q03591 330 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM128Q5BJH2 165 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 C19orf48Q6RUI8 117 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TFAP2EQ6VUC0 442 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TMEM99Q8N816 258 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR1F12Q8NHA8 337 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR11A1Q9GZK7 315 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 IGHV1-45A0A0A0MS14 117 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 LOC390937A0A1W2PQ73 354 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SOX15O60248 233 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NRASP01111 189 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TFP02787 698 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NFYAP23511 347 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CSF2RBP32927 897 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 TRAT1Q6PIZ9 186 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GABRG1Q8N1C3 465 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FLVCR1-AS1Q8TAF5 88 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 STOML3Q8TAV4 291 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 LGALS14Q8TCE9 139 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 APH1BQ8WW43 257 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GNRHR2Q96P88 292 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CMSS1Q9BQ75 279 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MED29Q9NX70 200 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KIF25Q9UIL4 384 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 hCG_1807616A0A1W2PRN6 198 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 C19orf67A6NJJ6 358 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KLK10O43240 276 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KCNJ3P48549 501 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CX3CR1P49238 355 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MGAT2Q10469 447 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FOXF1Q12946 379 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 APOOLQ6UXV4 268 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 THSD4Q6ZMP0 1018 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 STX12Q86Y82 276 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 CCDC71Q8IV32 467 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 RTL8AQ9BWD3 113 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NUP210LQ5VU65 1888 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MUC22E2RYF6 1773 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 A0A1W2PPK0 400 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NRG2O14511 850 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF44P15621 663 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ATAD3CQ5T2N8 411 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PIAS4Q8N2W9 510 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 BPIFB2Q8N4F0 458 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 C22orf15Q8WYQ4 148 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KISS1RQ969F8 398 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ZC3HAV1LQ96H79 300 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 EMC6Q9BV81 110 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 RNF122Q9H9V4 155 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 AKIP1Q9NQ31 210 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FLRT3Q9NZU0 649 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NCKAP5O14513 1909 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 NPIPB7O75200 414 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 JTBO76095 146 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FSTP19883 344 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 PTNP21246 168 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GIFP27352 417 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MDH2P40926 338 aaKnown RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DGLUCYQ7Z3D6 616 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR4K15Q8NH41 348 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MCHR2Q969V1 340 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ZNF486Q96H40 463 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SRRQ9GZT4 340 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SLC6A15Q9H2J7 730 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SLA2Q9H6Q3 261 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 KCNIP2Q9NS61 270 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 GDF2Q9UK05 429 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A10PA6NDY2 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A18PA6NE21 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A16PA6NEW6 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A20PA6NIJ5 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A8PA6NJQ4 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A7PA6NKC0 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR4C45A6NMZ5 311 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 OR2AT4A6NND4 320 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A22PA8MWA6 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A12PA8MX19 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A5PA8MXJ8 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A23PA8MXZ1 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A15PP0C7V4 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A13PP0C7W8 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A14PP0C7W9 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM90A24PP0C7X0 464 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MFGE8Q08431 387 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FBXW9Q5XUX1 488 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 DUSP18Q8NEJ0 188 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SEC22CQ9BRL7 303 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SELENOIQ9C0D9 397 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FOXD3Q9UJU5 478 aaPredicted RBP3.02□□□□□ -1.93
VPS13C-203ENST00000395896 RNF24Q9Y225 148 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 LRP12Q9Y561 859 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 FAM171A2A8MVW0 826 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 ST8SIA5O15466 376 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 MT-CO2P00403 227 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SP9P0CG40 484 aa3.02□□□□□ -1.93
VPS13C-203ENST00000395896 SHC1P29353 583 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms