RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 A0A087WUJ7 227 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 MT-ND4LP03901 98 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 FUT6P51993 359 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 RAB1AP62820 205 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 PHYHD1Q5SRE7 291 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 C17orf107Q6ZR85 190 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 GALMQ96C23 342 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SPNS1Q9H2V7 528 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SLC25A19Q9HC21 320 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SSPNQ14714 243 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SERGEFQ9UGK8 458 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 B9D1Q9UPM9 204 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF724A8MTY0 619 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 NME2P1O60361 137 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 DGCR2P98153 550 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 B4GALNT1Q00973 533 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 RNPS1Q15287 305 aaKnown RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 CTU2Q2VPK5 515 aaKnown RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ANKRD37Q7Z713 158 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 OR8U1Q8NH10 309 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SLC35B4Q969S0 331 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 C20orf24Q9BUV8 137 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 CDK5RAP2Q96SN8 1893 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SRP14P37108 136 aaKnown RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ISL1P61371 349 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF816Q0VGE8 651 aaPredicted RBP9.37□□□□□ -0.91
COL4A6-203ENST00000394872 AQP6Q13520 282 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 TPBGQ13641 420 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 HES3Q5TGS1 186 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 LYPD8Q6UX82 237 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 PTDSS2Q9BVG9 487 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 VN1R1Q9GZP7 353 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 SIAEQ9HAT2 523 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 A4GNTQ9UNA3 340 aa9.37□□□□□ -0.91
COL4A6-203ENST00000394872 IGHV1OR15-9A0A0B4J2B8 117 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 A0A1W2PR80 420 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SEC14L6B5MCN3 397 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 PPIHO43447 177 aaKnown RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ATF1P18846 271 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 BTG1P62324 171 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SYS1Q8N2H4 156 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SCARB1Q8WTV0 552 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SMIM19Q96E16 107 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF71Q9NQZ8 489 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 STRAPQ9Y3F4 350 aaKnown RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 IGHV5-51A0A0C4DH38 117 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 CHEK1O14757 476 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 MNX1P50219 401 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 OR1F12Q8NHA8 337 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 NUDCD2Q8WVJ2 157 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 EDARADDQ8WWZ3 215 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SLC39A7Q92504 469 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 AQP7P3A6NL99 342 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 M0R296 226 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 IL9P15248 144 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 DMRTC1Q5HYR2 192 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 GNRHR2Q96P88 292 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 MYOZ1Q9NP98 299 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ALG1L2C9J202 215 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 BMP5P22003 454 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 HRH1P35367 487 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TFF2Q03403 129 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 AVPI1Q5T686 147 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM211Q6ICI0 200 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 STAC2Q6ZMT1 411 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 FAM58AQ8N1B3 248 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 DTWD2Q8NBA8 298 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 KTI12Q96EK9 354 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 PELI1Q96FA3 418 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF251Q9BRH9 671 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 FSCN3Q9NQT6 498 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TIMM9Q9Y5J7 89 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 URGCP-MRPS24S4R325 110 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SCN7AQ01118 1682 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TEX51A0A1B0GUA7 166 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TAAR5O14804 337 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SLC31A2O15432 143 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 OR7C2O60412 319 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 FAHP16930 419 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 OR5B3Q8NH48 314 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ACTR3CQ9C0K3 210 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 CHST6Q9GZX3 395 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ESRP2Q9H6T0 727 aaKnown RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 PSENENQ9NZ42 101 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 GLI3P10071 1580 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 DHODHQ02127 395 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 TMEM92Q6UXU6 159 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ZNF705AQ6ZN79 300 aaPredicted RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 OR4F5Q8NH21 305 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 LURAP1Q96LR2 239 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 OR4F4Q96R69 305 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 ISG20L2Q9H9L3 353 aaKnown RBP9.36□□□□□ -0.91
COL4A6-203ENST00000394872 V9GYS6 101 aa9.36□□□□□ -0.91
COL4A6-203ENST00000394872 SLC25A6P12236 298 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 RNF151Q2KHN1 245 aa9.35□□□□□ -0.91
COL4A6-203ENST00000394872 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.35□□□□□ -0.91
COL4A6-203ENST00000394872 MFSD4AQ8N468 514 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms