RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 OR52W1Q6IF63 320 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF813Q6ZN06 617 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ASCC1Q8N9N2 400 aaKnown RBP9.8□□□□□ -0.84
TCOF1-203ENST00000394269 SLC25A28Q96A46 364 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 NICN1Q9BSH3 213 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 TINAGL1Q9GZM7 467 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ABI3Q9P2A4 366 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 MTFP1Q9UDX5 166 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 MGAT4AQ9UM21 535 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 FLVCR1Q9Y5Y0 555 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 A0A1B0GTI1 187 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 M0R135 149 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 NEURL1O76050 574 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 CYB5AP00167 134 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 AMY2AP04746 511 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF806P0C7X5 589 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 IGFBP3P17936 291 aaPredicted RBP9.8□□□□□ -0.84
TCOF1-203ENST00000394269 SSTR2P30874 369 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 B3GALT5-AS1P59052 145 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 CDNFQ49AH0 187 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 SLC22A24Q8N4F4 322 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ADPRHL1Q8NDY3 354 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 TMEM104Q8NE00 496 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 OR2T35Q8NGX2 323 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 FNDC9Q8TBE3 224 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 PNPLA2Q96AD5 504 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 SCMH1Q96GD3 660 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF799Q96GE5 643 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 CDC6Q99741 560 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 LDAHQ9H6V9 325 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 NIPAL2Q9H841 368 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 CPAMD8Q8IZJ3 1885 aa9.8□□□□□ -0.84
TCOF1-203ENST00000394269 COL5A1P20908 1838 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 TRAPPC2P0DI81 140 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 TRAPPC2BP0DI82 140 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CCL2P13500 99 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CNR1P21554 472 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 FAUP35544 74 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 ENDOGQ14249 297 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 C11orf88Q6PI97 169 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 OR2M7Q8NG81 312 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 DEDD2Q8WXF8 326 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 EIF3KQ9UBQ5 218 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 PIGLQ9Y2B2 252 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 EXPH5Q8NEV8 1989 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CIB4A0PJX0 185 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 RAB3DO95716 219 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 NR2C1P13056 603 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 GZMKP49863 264 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CDK10Q15131 360 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 STEAP1BQ6NZ63 245 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 C17orf107Q6ZR85 190 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 SLC16A14Q7RTX9 510 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 GGNQ86UU5 652 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF431Q8TF32 576 aaPredicted RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 SEH1LQ96EE3 360 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 LOXL4Q96JB6 756 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 S100A13Q99584 98 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CHST6Q9GZX3 395 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 FANCFQ9NPI8 374 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 MRPS28Q9Y2Q9 187 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 TNRC6BQ9UPQ9 1833 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 SGCEO43556 437 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 MRPL33O75394 65 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 ANXA3P12429 323 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF32P17041 273 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 HTR5AP47898 357 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 CCL11P51671 97 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 HIST3H3Q16695 136 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 SNAI3Q3KNW1 292 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 ELFN2Q5R3F8 820 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 OLFML2AQ68BL7 652 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 TMEM123Q8N131 208 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 C15orf40Q8WUR7 153 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 C7orf50Q9BRJ6 194 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 MGAT4CQ9UBM8 478 aa9.79□□□□□ -0.84
TCOF1-203ENST00000394269 NOSIPQ9Y314 301 aaKnown RBP9.79□□□□□ -0.84
TCOF1-203ENST00000394269 FAM208BQ5VWN6 2430 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FAM230AA0A1W2PPH8 454 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 SERPINA2P20848 420 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 CSRP1P21291 193 aaKnown RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 ERP29P30040 261 aaKnown RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 ARG2P78540 354 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 MRPS10P82664 201 aaKnown RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 IDO2Q6ZQW0 420 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 DTX1Q86Y01 620 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 GALNT16Q8N428 558 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 TNFAIP8L1Q8WVP5 186 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 GPR87Q9BY21 358 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 ACTR6Q9GZN1 396 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 OR51B6Q9H340 312 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 B4GALT7Q9UBV7 327 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 ZNF736B4DX44 427 aaPredicted RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 CSF1P09603 554 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 AKAIN1P0CW23 69 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FCGR2AP12318 317 aa9.78□□□□□ -0.84
TCOF1-203ENST00000394269 GRB2P62993 217 aaKnown RBP9.78□□□□□ -0.84
TCOF1-203ENST00000394269 FOXO1Q12778 655 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms