RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 NDRG3Q9UGV2 375 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 FOXJ3Q9UPW0 622 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF816-ZNF321PA0A0X1KG74 233 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR2W5A6NFC9 320 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ARPC3O15145 178 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 IGHA2P01877 340 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 GSK3AP49840 483 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR8G1Q15617 311 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 TMEM240Q5SV17 173 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF793Q6ZN11 406 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 ZNF321PQ8N8H1 164 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR4F5Q8NH21 305 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 THOC3Q96J01 351 aaKnown RBP11.85□□□□□ -0.51
LCA5-202ENST00000392959 OR4F4Q96R69 305 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 C12orf57Q99622 126 aa11.85□□□□□ -0.51
LCA5-202ENST00000392959 NKX6-3A6NJ46 265 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 TRAF3IP2O43734 574 aaPredicted RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZFPL1O95159 310 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 CXCL10P02778 98 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 WNT1P04628 370 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 IL3RAP26951 378 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 PNLIPRP3Q17RR3 467 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 LSRQ86X29 649 aaPredicted RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZNF573Q86YE8 665 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZNF485Q8NCK3 441 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 OR1J1Q8NGS3 322 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 USB1Q9BQ65 265 aaKnown RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 PPIL1Q9Y3C6 166 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 hCG_1809904A0A1W2PP81 198 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 A0A1W2PPE2 198 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 A0A1W2PR64 198 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 A0A1W2PRV1 198 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 PRSS23O95084 383 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 NKX2-2O95096 273 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 HOXD11P31277 338 aaPredicted RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 YBX1P67809 324 aaKnown RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 RNF212Q495C1 297 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZNF787Q6DD87 383 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 LIMS2Q7Z4I7 341 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 BPIFCQ8NFQ6 507 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ANGPTL6Q8NI99 470 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 TVP23CQ96ET8 276 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 SMIM7Q9BQ49 75 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 RHOFQ9HBH0 211 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 DLL4Q9NR61 685 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 MEIKINA0A087WXM9 373 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 SH2D1BO14796 132 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 AQP8O94778 261 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 CPN1P15169 458 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 INSL4Q14641 139 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 OR2B11Q5JQS5 317 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 GPR119Q8TDV5 335 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 MARVELD1Q9BSK0 173 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ACTR3CQ9C0K3 210 aaPredicted RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 TWSG1Q9GZX9 223 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 MMP25Q9NPA2 562 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 C20orf141Q9NUB4 165 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 FBXO4Q9UKT5 387 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 HDGFL3Q9Y3E1 203 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 A0A1W2PPC4 97 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 OR2J2O76002 312 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZNF90Q03938 601 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ST3GAL2Q16842 350 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 DMRTC1Q5HYR2 192 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 TTC9Q92623 222 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 ZG16BQ96DA0 208 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 MTFP1Q9UDX5 166 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 TBX21Q9UL17 535 aa11.84□□□□□ -0.51
LCA5-202ENST00000392959 MRPS2Q9Y399 296 aaKnown RBP11.84□□□□□ -0.51
LCA5-202ENST00000392959 CYTIPO60759 359 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 SLC25A1P53007 311 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 EMP3P54852 163 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 H3F3AP84243 136 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 FZD2Q14332 565 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 LRRTM1Q86UE6 522 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 FAM185AQ8N0U4 392 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 KTI12Q96EK9 354 aaPredicted RBP11.83□□□□□ -0.52
LCA5-202ENST00000392959 LIN7CQ9NUP9 197 aaKnown RBP11.83□□□□□ -0.52
LCA5-202ENST00000392959 LRP12Q9Y561 859 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 N4BP2Q86UW6 1770 aaPredicted RBP11.83□□□□□ -0.52
LCA5-202ENST00000392959 LRP5O75197 1615 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 IGHV3-64DA0A0J9YX35 117 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 C5orf49A4QMS7 147 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 LRRC30A6NM36 301 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 SIRPB1O00241 398 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 FAHP16930 419 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 FOXF1Q12946 379 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 TIGITQ495A1 244 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 CD300LDQ6UXZ3 194 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 CISD2Q8N5K1 135 aaKnown RBP11.83□□□□□ -0.52
LCA5-202ENST00000392959 KIAA1958Q8N8K9 716 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 OR4C3Q8NH37 302 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 PP6455Q8WZ26 134 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 ZNF355PQ9NSJ1 428 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 METAP1P53582 386 aa11.83□□□□□ -0.52
LCA5-202ENST00000392959 SUMO3P55854 103 aaPredicted RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms