RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 PRLHRP49683 370 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF252P-AS1Q0IIN9 211 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 MORN1Q5T089 497 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 FGF13Q92913 245 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 HAND1O96004 215 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 MDH2P40926 338 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TAAR9Q96RI9 348 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 C11orf68Q9H3H3 251 aaKnown RBP13.44□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM38AQ9H6F2 299 aa13.44□□□□□ -0.26
CCDC50-201ENST00000392455 COL2A1P02458 1487 aaPredicted RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 GJB3O75712 270 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RHOBP62745 196 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CLN3Q13286 438 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 MYOZ3Q8TDC0 251 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CSF3RQ99062 836 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SUCNR1Q9BXA5 334 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 GPR61Q9BZJ8 451 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 PSORS1C1Q9UIG5 152 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CD38P28907 300 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 ADRA1AP35348 466 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 TMEM65Q6PI78 240 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 GALNT16Q8N428 558 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 PDLIM5Q96HC4 596 aaKnown RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 I6L893 689 aaPredicted RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RAB27BO00194 218 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 HS3ST1O14792 307 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SCRG1O75711 98 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CSNK1DP48730 415 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 DEFB103AP81534 67 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF141Q15928 474 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SCD5Q86SK9 330 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 MS4A10Q96PG2 267 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SLC22A13Q9Y226 551 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RGS13O14921 159 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 NME1P15531 152 aaKnown RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RNASEKQ6P5S7 137 aaKnown RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CHST6Q9GZX3 395 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SLC23A1Q9UHI7 598 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SNX11Q9Y5W9 270 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 H3BVH4 76 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 PIPP12273 146 aaPredicted RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 BSGP35613 385 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 METAP1P53582 386 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 P2RX3P56373 397 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 PRR27Q6MZM9 219 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 C19orf47Q8N9M1 422 aaKnown RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 OR51F2Q8NH61 342 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RTN4IP1Q8WWV3 396 aaPredicted RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 RLN3Q8WXF3 142 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 MARCH5Q9NX47 278 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 NEURL1O76050 574 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 GRPP07492 148 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 CLLU1Q5K131 121 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SLC36A1Q7Z2H8 476 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 C2orf50Q96LR7 162 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 SNRPBP14678 240 aaKnown RBP13.43□□□□□ -0.26
CCDC50-201ENST00000392455 C19orf57Q0VDD7 668 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 HTR3DQ70Z44 454 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 FAM117AQ9C073 453 aa13.43□□□□□ -0.26
CCDC50-201ENST00000392455 A6NIN4 97 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 UTS2O95399 124 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 MBD3L1Q8WWY6 194 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 RAB40CQ96S21 281 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 LRFN3Q9BTN0 628 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 PELI1Q96FA3 418 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 OR8G3PP0DMU2 310 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 MAT1AQ00266 395 aaKnown RBP13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF528Q3MIS6 628 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF66Q6ZN08 573 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 LKAAEAR1Q8TD35 194 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ZNF426Q9BUY5 554 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 LYRM4Q9HD34 91 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 NCR1O76036 304 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 JOSD1Q15040 202 aaPredicted RBP13.42□□□□□ -0.26
CCDC50-201ENST00000392455 DHRS13Q6UX07 377 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 FADS6Q8N9I5 356 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 RAB37Q96AX2 223 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 GPX7Q96SL4 187 aaPredicted RBP13.42□□□□□ -0.26
CCDC50-201ENST00000392455 CALHM2Q9HA72 323 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 DUXBA0A1W2PPF3 345 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 H3BNC9 293 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 CEACAM3P40198 252 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 OR51H1Q8NH63 302 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 MAP6Q96JE9 813 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 OR6C1Q96RD1 312 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 SLC7A10Q9NS82 523 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 GPR45Q9Y5Y3 372 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ZP3P21754 424 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 GLRA1P23415 457 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ACP1P24666 158 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 ANKLE1Q8NAG6 615 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 HSD17B8Q92506 261 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 HGDQ93099 445 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 SHISA4Q96DD7 197 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 HSFX1Q9UBD0 423 aa13.42□□□□□ -0.26
CCDC50-201ENST00000392455 GDF2Q9UK05 429 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms