RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 RAP1GDS1P52306 607 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ATP1B3P54709 279 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MLF1P58340 268 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PITPNAQ00169 270 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MEF2BQ02080 365 aaPredicted RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RAD51Q06609 339 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 C2orf54Q08AI8 447 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MGAT3Q09327 533 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SCRN3Q0VDG4 424 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MED21Q13503 144 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 C1orf61Q13536 156 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 TNXAQ16473 311 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 TMEM249Q2WGJ8 235 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RFX4Q33E94 735 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 GGTA1PQ4G0N0 100 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PTPN20Q4JDL3 420 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ZCWPW2Q504Y3 356 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 DNLZQ5SXM8 178 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 BEND3Q5T5X7 828 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 DUPD1Q68J44 220 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 FAM71F2Q6NXP2 309 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 C3orf33Q6P1S2 294 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF620Q6ZNG0 422 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CCDC121Q6ZUS5 278 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF571Q7Z3V5 609 aaPredicted RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 HDDC2Q7Z4H3 204 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 LRP11Q86VZ4 500 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CLVS1Q8IUQ0 354 aaPredicted RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SLC38A6Q8IZM9 456 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 TRAM1L1Q8N609 369 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 NATD1Q8N6N6 113 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 LINC00304Q8N9R0 145 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CCDC112Q8NEF3 446 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 STXBP6Q8NFX7 210 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 OR4D5Q8NGN0 318 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 OR1L6Q8NGR2 347 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 OR52E5Q8NH55 327 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 OR1F12Q8NHA8 337 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RNF133Q8WVZ7 376 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 DYDC1Q8WWB3 177 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PIH1D2Q8WWB5 315 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ACOT11Q8WXI4 607 aaPredicted RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 FGF11Q92914 225 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RMND5BQ96G75 393 aaPredicted RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 DNAJC1Q96KC8 554 aaKnown RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 BMFQ96LC9 184 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RNF145Q96MT1 663 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MBOAT7Q96N66 472 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 AMDHD1Q96NU7 426 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PRAP1Q96NZ9 151 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SERPINB11Q96P15 392 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CSPG4P5Q96PW8 444 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SLC38A2Q96QD8 506 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 COPS8Q99627 209 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PRRT1Q99946 306 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF251Q9BRH9 671 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 NDFIP1Q9BT67 221 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CALN1Q9BXU9 219 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 NEUROG2Q9H2A3 272 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SRMSQ9H3Y6 488 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CLMPQ9H6B4 373 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SIAEQ9HAT2 523 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 UGT1A10Q9HAW8 530 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 PRSS16Q9NQE7 514 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 EXD2Q9NVH0 621 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 RHBDL2Q9NX52 303 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 TAS2R9Q9NYW1 312 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 USE1Q9NZ43 259 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 IFNKQ9P0W0 207 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MYEF2Q9P2K5 600 aaKnown RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 UVRAGQ9P2Y5 699 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 CLN8Q9UBY8 286 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 NXT1Q9UKK6 140 aaKnown RBP1.45□□□□□ -2.18
TRAV40-201ENST00000390467 IKZF2Q9UKS7 526 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 SLC22A13Q9Y226 551 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 GSTK1Q9Y2Q3 226 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 POLDIP2Q9Y2S7 368 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MEMO1Q9Y316 297 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ZNF337Q9Y3M9 751 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 HYOU1Q9Y4L1 999 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 ALG6Q9Y672 507 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 V9GYQ6 96 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 MAP3K5Q99683 1374 aa1.45□□□□□ -2.18
TRAV40-201ENST00000390467 A0A1B0GTI1 187 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 A0A1B0GUS0 222 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GNG14A0A1W2PPG7 69 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SLC5A10A0PJK1 596 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 PLAC8L1A1L4L8 177 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 EFCAB10A6NFE3 127 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 TMEM114B3SHH9 223 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 RPL36A-HNRNPH2H7BZ11 118 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 CLDN34H7C241 214 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 M0QXV9 152 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 DYNC1I1O14576 645 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 GOSR2O14653 212 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MSH4O15457 936 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 AQP9O43315 295 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 MBTPS2O43462 519 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 HUS1O60921 280 aa1.44□□□□□ -2.18
TRAV40-201ENST00000390467 SMIM24O75264 130 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms