RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 JTBO76095 146 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 IFNA6P05013 189 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 PET100P0DJ07 73 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 SLC9A3R2Q15599 337 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 UBE2V2Q15819 145 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 CST6Q15828 149 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 ZNF385CQ66K41 422 aaPredicted RBP13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 ULK3Q6PHR2 472 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 CLEC18BQ6UXF7 455 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 OR5R1Q8NH85 324 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 RAB24Q969Q5 203 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 TMEM230Q96A57 120 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 AMELYQ99218 206 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 WDR76Q9H967 626 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 SLC22A13Q9Y226 551 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 KCNIP3Q9Y2W7 256 aa13.09□□□□□ -0.31
VPS9D1-201ENST00000389386 MUC22E2RYF6 1773 aaPredicted RBP13.08□□□□□ -0.31
VPS9D1-201ENST00000389386 SFT2D2O95562 160 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 OR13C7P0DN81 318 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 RPS4XP62701 263 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 SPEM2Q0P670 501 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 HIST2H3PS2Q5TEC6 136 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 METRNLQ641Q3 311 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF765Q7L2R6 523 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 OR6N2Q8NGY6 317 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 PPP1R14AQ96A00 147 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 CMBLQ96DG6 245 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 MVB12AQ96EY5 273 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 COX14Q96I36 57 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 GPX7Q96SL4 187 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 FAM212BQ9NTI7 297 aaPredicted RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 DNAJB12Q9NXW2 375 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 A0A087WUJ7 227 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 DCDC2BA2VCK2 349 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 PTBP3O95758 552 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 POU2F2P09086 479 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 CXCL1P09341 107 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 FABP4P15090 132 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 G0S2P27469 103 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 RPP30P78346 268 aaKnown RBP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 ANKRD55Q3KP44 614 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 NDUFAF3Q9BU61 184 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 S1PR5Q9H228 398 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 SRMSQ9H3Y6 488 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 TAS2R4Q9NYW5 299 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 PUS1Q9Y606 427 aaKnown RBP eCLIP13.08□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF727A8MUV8 499 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 IGFBP3P17936 291 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 IL2RGP31785 369 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 S100A10P60903 97 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 MTSS1LQ765P7 747 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF761Q86XN6 746 aaPredicted RBP13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 CDRT4Q8N9R6 151 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 SEMA6DQ8NFY4 1073 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 Q8WTZ3 238 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 NKD1Q969G9 470 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 GAL3ST3Q96A11 431 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 PTX4Q96A99 478 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 CNTNAP3Q9BZ76 1288 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 METTL9Q9H1A3 318 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 C5orf66Q9H5L9 145 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 FBXO7Q9Y3I1 522 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 MTCH2Q9Y6C9 303 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 LAMA1P25391 3075 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 ARID1AO14497 2285 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 A0A087WV62 115 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 RAMP1O60894 148 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 MBP02144 154 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 DANCRP0C864 163 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 RPL12P30050 165 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 GABRA3P34903 492 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 IGFALSP35858 605 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 TNFRSF9Q07011 255 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF616Q08AN1 781 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 ELOBQ15370 118 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 TMEM31Q5JXX7 168 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 TMEM184AQ6ZMB5 413 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 OR14C36Q8NHC7 312 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 TERB2Q8NHR7 220 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 ASB5Q8WWX0 329 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 HDAC8Q9BY41 377 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 METTL8Q9H825 291 aaKnown RBP13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 GSKIPQ9P0R6 139 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 CKLFQ9UBR5 152 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 GTF2A1LQ9UNN4 478 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 HS3ST3B1Q9Y662 390 aa13.07□□□□□ -0.32
VPS9D1-201ENST00000389386 HSPB2A8KAH6 182 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 SLC31A1O15431 190 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 SLC35G4P0C7Q5 338 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 LMO1P25800 156 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 PRPS1P60891 318 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 SUPT4H1P63272 117 aaKnown RBP13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 NKX6-1P78426 367 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 MLF2Q15773 248 aaPredicted RBP13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 HSPB2Q16082 182 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 ZNF343Q6P1L6 599 aa13.06□□□□□ -0.32
VPS9D1-201ENST00000389386 BEND2Q8NDZ0 799 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms