RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 RTN4RL2Q86UN3 420 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF429Q86V71 674 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 HOGA1Q86XE5 327 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 CDC20BQ86Y33 519 aa16.97■□□□□ 0.31
SMARCD1-201ENST00000381513 A0A087WUJ7 227 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 DFFBO76075 338 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 LYL1P12980 280 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 SMAD4Q13485 552 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 ARHGAP19Q14CB8 494 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 PRR18Q8N4B5 295 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 OR4D6Q8NGJ1 314 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 AQP3Q92482 292 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 PRRX2Q99811 253 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 APOBEC3BQ9UH17 382 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 LDB3O75112 727 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 GAPDHP04406 335 aaKnown RBP16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 S1PR1P21453 382 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 GLRA1P23415 457 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 PLAURQ03405 335 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 LRP11Q86VZ4 500 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 SLC35G3Q8N808 338 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 OR2I1PQ8NGU4 316 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 R3HDM4Q96D70 268 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 NUS1Q96E22 293 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF514Q96K75 400 aaPredicted RBP16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 NIPSNAP3BQ9BS92 247 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 ZNF860A6NHJ4 632 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 LATO43561 262 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 ENPP2Q13822 863 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 BATFQ16520 125 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 FCRL6Q6DN72 434 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 TMEM25Q86YD3 366 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 OR13C3Q8NGS6 347 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 THRSPQ92748 146 aa16.96■□□□□ 0.31
SMARCD1-201ENST00000381513 SDCBPO00560 298 aaPredicted RBP16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 DVL1O14640 695 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 PNPP00491 289 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 PCCBP05166 539 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 PAX1P15863 534 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 THBS4P35443 961 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 PHF19Q5T6S3 580 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 GRHPRQ9UBQ7 328 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 PITPNC1Q9UKF7 332 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 TMEM14AQ9Y6G1 99 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 CCDC187A0A096LP49 1063 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 OR6A2O95222 327 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 GALTP07902 379 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 RBMXP38159 391 aaKnown RBP16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 GNALP38405 381 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 METAP1P53582 386 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 SPEM2Q0P670 501 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 C1orf87Q8N0U7 546 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 LPAR4Q99677 370 aa16.95■□□□□ 0.3
SMARCD1-201ENST00000381513 AHSA1O95433 338 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 AMBPP02760 352 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 AKR1A1P14550 325 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 NCR3LG1Q68D85 454 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 ZNF705AQ6ZN79 300 aaPredicted RBP16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 P4HA3Q7Z4N8 544 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 ASB5Q8WWX0 329 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 GPR132Q9UNW8 380 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 B9D1Q9UPM9 204 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 TGOLN2O43493 480 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 OR5H8P0DN80 308 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 OR3A2P47893 321 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 NKAIN1Q4KMZ8 207 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 ALG10Q5BKT4 473 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 C1orf189Q5VU69 101 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 VITQ6UXI7 678 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 COX15Q7KZN9 410 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 PARS2Q7L3T8 475 aaKnown RBP16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 MARCH3Q86UD3 253 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 C17orf78Q8N4C9 275 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 OR2A1Q8NGT9 310 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 OR13D1Q8NGV5 346 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 WNT5BQ9H1J7 359 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 TMEM269A0A1B0GVZ9 245 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 WIPF3A6NGB9 483 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 ASCL1P50553 236 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 TDGF1P3P51864 188 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 PRPS1P60891 318 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 DEFB134Q4QY38 66 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 PLXDC2Q6UX71 529 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 FNDC9Q8TBE3 224 aa16.94■□□□□ 0.3
SMARCD1-201ENST00000381513 TOX3O15405 576 aaPredicted RBP16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 XRCC2O43543 280 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 TIMP1P01033 207 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 RPS4Y1P22090 263 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 CCR4P51679 360 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 SUPT4H1P63272 117 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 ZNF461Q8TAF7 563 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 MRGPRX3Q96LB0 322 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 HSF4Q9ULV5 492 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 RBFOX3A6NFN3 312 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 NSA2O95478 260 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 SEC11BP0C7V7 166 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 ACAA2P42765 397 aaKnown RBP16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 CCL20P78556 96 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 TVP23CQ96ET8 276 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms