RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 ANTXRLA6NF34 631 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 TMX2-CTNND1H3BSU7 103 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 ALOX12BO75342 701 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 SDHBP21912 280 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 RIPPLY3P57055 190 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 MZT1Q08AG7 82 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 RGNQ15493 299 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 TP53I13Q8NBR0 393 aaPredicted RBP9.82□□□□□ -0.84
CLCN4-202ENST00000380833 LHX4Q969G2 390 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 INSM2Q96T92 566 aaPredicted RBP9.82□□□□□ -0.84
CLCN4-202ENST00000380833 MAP1LC3CQ9BXW4 147 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 PEF1Q9UBV8 284 aaKnown RBP9.82□□□□□ -0.84
CLCN4-202ENST00000380833 C10orf71Q711Q0 1435 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 RECKO95980 971 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 CA2P00918 260 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF728P0DKX0 622 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 MMP15P51511 669 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 FAM71CQ8NEG0 241 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 OR52I1Q8NGK6 324 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 RBM38Q9H0Z9 239 aaKnown RBP9.82□□□□□ -0.84
CLCN4-202ENST00000380833 ZMAT3Q9HA38 289 aaKnown RBP9.82□□□□□ -0.84
CLCN4-202ENST00000380833 HES4Q9HCC6 221 aa9.82□□□□□ -0.84
CLCN4-202ENST00000380833 ERVH48-1M5A8F1 160 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 EIF1BO60739 113 aaKnown RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 EIF1P41567 113 aaKnown RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 C10orf126Q8N4M7 172 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 MRPL43Q8N983 215 aaKnown RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR10W1Q8NGF6 305 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR52N5Q8NH56 324 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF426Q9BUY5 554 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 WDR76Q9H967 626 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 IFITM10A6NMD0 228 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 LINC00614P0C842 121 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ATP1B3P54709 279 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ERVS71-1P61550 626 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 UBE2G1P62253 170 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR1L3Q8NH93 324 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 LKAAEAR1Q8TD35 194 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ATP5SQ99766 215 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 VCX2Q9H322 139 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 MUTYHQ9UIF7 546 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF443Q9Y2A4 671 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 A0A1W2PRD5 423 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 A0A1W2PRF3 423 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 A0A1W2PRM7 423 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 MPTX1A8MV57 137 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ARNTLO00327 626 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 Q6ZPB1 254 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 NANOGP1Q8N7R0 232 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ADAMTS18Q8TE60 1221 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 NAT6Q93015 286 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 SLC22A12Q96S37 553 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 GPX7Q96SL4 187 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 SLIT2O94813 1529 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PRRG2O14669 202 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PIAS2O75928 621 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 CST4P01036 141 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 NRASP01111 189 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 HRASP01112 189 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 KRASP01116 189 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PTHLHP12272 177 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PIGAP37287 484 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 P2RY4P51582 365 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 KLF3P57682 345 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PAX5Q02548 391 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 SPEM2Q0P670 501 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 CTF1Q16619 201 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 HLA-DRB5Q30154 266 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ACER2Q5QJU3 275 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 MRM1Q6IN84 353 aaKnown RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 CBLL1Q75N03 491 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR10X1Q8NGY0 326 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR13C6PQ8NH95 151 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 TCTN2Q96GX1 697 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 LRRC3BQ96PB8 259 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 DOK1Q99704 481 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 SLC26A1Q9H2B4 701 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 SMOC1Q9H4F8 434 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 PEAK1Q9H792 1746 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 P2RY10O00398 339 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF593O00488 134 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 MFNGO00587 321 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 GPX5O75715 221 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ITGB7P26010 798 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ATP5IP56385 69 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 OR1Q1Q15612 314 aa9.81□□□□□ -0.84
CLCN4-202ENST00000380833 ZNF48Q96MX3 618 aaPredicted RBP9.81□□□□□ -0.84
CLCN4-202ENST00000380833 UBE2MP61081 183 aaKnown RBP9.8□□□□□ -0.84
CLCN4-202ENST00000380833 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TMEM179BQ7Z7N9 219 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR2M7Q8NG81 312 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR13H1Q8NG92 308 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 OR4C16Q8NGL9 310 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 C2orf50Q96LR7 162 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 TIMP4Q99727 224 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 SELENOIQ9C0D9 397 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 RAB9BQ9NP90 201 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 FAM24AA6NFZ4 105 aa9.8□□□□□ -0.84
CLCN4-202ENST00000380833 MARCH11A6NNE9 402 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms