RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 SLC23A1Q9UHI7 598 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 MEIS3P1A6NDR6 274 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 TERTO14746 1132 aaKnown RBP18.99■□□□□ 0.63
TRIM54-202ENST00000380075 C4BPBP20851 252 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 PER3P56645 1201 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 FAM189A2Q15884 450 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ZBTB37Q5TC79 503 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 H3F3CQ6NXT2 135 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 OR2W3Q7Z3T1 314 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 OR13C9Q8NGT0 318 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ASB13Q8WXK3 278 aa18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ELF5Q9UKW6 265 aaPredicted RBP18.99■□□□□ 0.63
TRIM54-202ENST00000380075 ANKRD34BA5PLL1 514 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 RAB27BO00194 218 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 RLN1P04808 185 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 ITGB2P05107 769 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 VSIG10L2P0DP72 767 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF93P35789 620 aaPredicted RBP18.98■□□□□ 0.63
TRIM54-202ENST00000380075 MEF2DQ14814 521 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 SGCAQ16586 387 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF260Q3ZCT1 412 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 COMMD2Q86X83 199 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 TMEM123Q8N131 208 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF416Q9BWM5 594 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 MYOZ1Q9NP98 299 aaPredicted RBP18.98■□□□□ 0.63
TRIM54-202ENST00000380075 GPR84Q9NQS5 396 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 IL17BQ9UHF5 180 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 RAXQ9Y2V3 346 aa18.98■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF736B4DX44 427 aaPredicted RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 G3V3Q6 166 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 KLK10O43240 276 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 EIF2S3P41091 472 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 RPS18P62269 152 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 DHODHQ02127 395 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 MOGAT2Q3SYC2 334 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 OR10K2Q6IF99 312 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF584Q8IVC4 421 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 PAQR4Q8N4S7 273 aaPredicted RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 CCDC54Q8NEL0 328 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 OR8S1Q8NH09 359 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 EXO5Q9H790 373 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 EIF3KQ9UBQ5 218 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 A0A0J9YW62 118 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 TMEM14DPA8MWL7 114 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 DHHO43323 396 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 APOC1P02654 83 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 VSIG8P0DPA2 414 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 OTX2P32243 289 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 GNG2P59768 71 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 RAC3P60763 192 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 UNC119Q13432 240 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 ZMYND11Q15326 602 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 LGALSLQ3ZCW2 172 aaPredicted RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 AWAT2Q6E213 333 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 BEST3Q8N1M1 668 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 ACBD4Q8NC06 268 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 OR8H1Q8NGG4 311 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 ZCCHC14Q8WYQ9 949 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF385AQ96PM9 386 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 TMPRSS13Q9BYE2 586 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 PIPOXQ9P0Z9 390 aa18.97■□□□□ 0.63
TRIM54-202ENST00000380075 FOXD3Q9UJU5 478 aaPredicted RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 FARSAQ9Y285 508 aaKnown RBP18.97■□□□□ 0.63
TRIM54-202ENST00000380075 G3V3Y1 287 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 TSC22D2O75157 780 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 CHRM2P08172 466 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF84P51523 738 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 HIST1H3AP68431 136 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 IKZF1Q13422 519 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 HIST2H3PS2Q5TEC6 136 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 ZNF468Q5VIY5 522 aaPredicted RBP18.96■□□□□ 0.63
TRIM54-202ENST00000380075 TEX261Q6UWH6 196 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 HIST2H3AQ71DI3 136 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 B3GNT2Q9NY97 397 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 MRPS18CQ9Y3D5 142 aaKnown RBP18.96■□□□□ 0.63
TRIM54-202ENST00000380075 U3KQ87 197 aa18.96■□□□□ 0.63
TRIM54-202ENST00000380075 TMEM235A6NFC5 223 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 C21orf140B9A014 251 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 SERPINA7P05543 415 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 MPZP25189 248 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 B3GALT5-AS1P59052 145 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 ENDOGQ14249 297 aaKnown RBP18.95■□□□□ 0.62
TRIM54-202ENST00000380075 MPPED2Q15777 294 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 FAM57BQ71RH2 274 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 ANGPTL5Q86XS5 388 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 OR5AS1Q8N127 324 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 DVL3Q92997 716 aaPredicted RBP18.95■□□□□ 0.62
TRIM54-202ENST00000380075 NABP1Q96AH0 204 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 UCN2Q96RP3 112 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 GAL3ST1Q99999 423 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 GPR87Q9BY21 358 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 CLEC4MQ9H2X3 399 aaPredicted RBP18.95■□□□□ 0.62
TRIM54-202ENST00000380075 CA10Q9NS85 328 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 SLC2A8Q9NY64 477 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 A0A0U1RQV5 110 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 DISC1C4P0D8 188 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 TNFSF11O14788 317 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 WDPCPO95876 746 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 IGLV3-1P01715 115 aa18.95■□□□□ 0.62
TRIM54-202ENST00000380075 UBBP0CG47 229 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms